Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS05840

Experiment: MHII_biocarbonate_serum_Chelated; 35C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MHII_biocarbonate_serum_Chelated; 35C
1,225,787	-		RR41_RS05830	0.87	-0.8
1,225,798	+		RR41_RS05830	0.88	-0.6
1,225,798	+		RR41_RS05830	0.88	-1.5
1,225,823	-				-1.1
1,225,878	+				+1.0
1,225,980	+				+1.4
1,226,001	+				-0.7
1,226,001	+				+0.1
1,226,002	-				+2.0
1,226,004	-				+0.7
1,226,009	+				+0.6
1,226,055	+				-1.5
1,226,069	+				-0.4
1,226,069	+				+2.3
1,226,076	+				+0.1
1,226,076	+				-1.9
1,226,076	+				-1.1
1,226,163	-		RR41_RS05835	0.15	+1.1
1,226,163	-		RR41_RS05835	0.15	-0.2
1,226,195	+		RR41_RS05835	0.20	+0.4
1,226,212	-		RR41_RS05835	0.23	+0.7
1,226,241	-		RR41_RS05835	0.27	-0.3
1,226,241	-		RR41_RS05835	0.27	-2.3
1,226,255	+		RR41_RS05835	0.29	+1.6
1,226,255	+		RR41_RS05835	0.29	-0.9
1,226,273	+		RR41_RS05835	0.32	-0.9
1,226,274	-		RR41_RS05835	0.32	+0.7
1,226,274	-		RR41_RS05835	0.32	-0.6
1,226,278	-		RR41_RS05835	0.33	+0.3
1,226,278	-		RR41_RS05835	0.33	+4.2
1,226,348	+		RR41_RS05835	0.44	-0.6
1,226,353	-		RR41_RS05835	0.44	-0.5
1,226,353	-		RR41_RS05835	0.44	-1.5
1,226,364	+		RR41_RS05835	0.46	-0.6
1,226,365	-		RR41_RS05835	0.46	+1.0
1,226,365	-		RR41_RS05835	0.46	-0.3
1,226,365	-		RR41_RS05835	0.46	+2.7
1,226,371	-		RR41_RS05835	0.47	+0.1
1,226,384	-		RR41_RS05835	0.49	-0.9
1,226,556	+		RR41_RS05835	0.76	-1.6
1,226,567	+		RR41_RS05835	0.77	+0.9
1,226,568	-		RR41_RS05835	0.77	+0.5
1,226,628	+		RR41_RS05835	0.87	+1.7
1,226,667	+				+1.0
1,226,668	-				-0.3
1,226,668	-				-1.3
1,226,668	-				+1.7
1,226,668	-				+1.7
1,226,680	-				+1.1
1,226,717	+				+1.0
1,226,717	+				+0.4
1,226,717	+				-0.9
1,226,717	+				+0.7
1,226,717	+				+1.7
1,226,718	-				-0.9
1,226,718	-				+2.7
1,226,718	-				-2.0
1,226,718	-				-0.3
1,226,718	-				+0.1
1,226,720	-				+0.1
1,226,776	+				+0.7
1,226,776	+				-0.3
1,226,777	-				+0.1
1,226,804	-				-1.8
1,226,824	+		RR41_RS05840	0.11	-2.3
1,226,826	+		RR41_RS05840	0.11	+0.4
1,226,826	+		RR41_RS05840	0.11	-2.3
1,226,827	-		RR41_RS05840	0.11	-1.0
1,226,827	-		RR41_RS05840	0.11	-0.6
1,226,932	+		RR41_RS05840	0.24	-2.2
1,226,932	+		RR41_RS05840	0.24	-0.9
1,226,932	+		RR41_RS05840	0.24	-0.6
1,226,932	+		RR41_RS05840	0.24	+0.7
1,226,932	+		RR41_RS05840	0.24	-0.9
1,226,933	-		RR41_RS05840	0.24	-0.3
1,226,933	-		RR41_RS05840	0.24	+0.7
1,226,933	-		RR41_RS05840	0.24	-1.9
1,226,937	+		RR41_RS05840	0.24	-1.3
1,226,950	+		RR41_RS05840	0.26	-1.5
1,226,950	+		RR41_RS05840	0.26	-0.8
1,226,955	+		RR41_RS05840	0.27	-1.5
1,226,974	+		RR41_RS05840	0.29	-0.3
1,226,983	+		RR41_RS05840	0.30	-1.1
1,227,026	-		RR41_RS05840	0.35	-1.9
1,227,045	+		RR41_RS05840	0.38	-1.5
1,227,045	+		RR41_RS05840	0.38	-0.2
1,227,046	-		RR41_RS05840	0.38	-1.6
1,227,094	+		RR41_RS05840	0.44	+0.7
1,227,094	+		RR41_RS05840	0.44	-0.9
1,227,095	-		RR41_RS05840	0.44	-1.1
1,227,114	-		RR41_RS05840	0.46	-2.0
1,227,128	-		RR41_RS05840	0.48	-0.9
1,227,139	+		RR41_RS05840	0.49	+0.1
1,227,168	-		RR41_RS05840	0.53	+1.7
1,227,192	-		RR41_RS05840	0.56	-0.3
1,227,192	-		RR41_RS05840	0.56	+0.7
1,227,221	+		RR41_RS05840	0.59	-1.1
1,227,277	+		RR41_RS05840	0.66	-1.1
1,227,278	-		RR41_RS05840	0.66	+0.9
1,227,283	+		RR41_RS05840	0.67	-1.5
1,227,291	+		RR41_RS05840	0.68	-1.1
1,227,371	-		RR41_RS05840	0.78	-2.7
1,227,431	-		RR41_RS05840	0.85	-1.3
1,227,431	-		RR41_RS05840	0.85	-0.9
1,227,498	+				-0.3
1,227,502	+				-1.1
1,227,502	+				-2.5
1,227,502	+				-0.5
1,227,530	+				-2.8
1,227,531	-				+0.1
1,227,581	+				+0.1
1,227,655	-		RR41_RS05845	0.14	+0.7
1,227,661	+		RR41_RS05845	0.15	-0.6
1,227,685	+		RR41_RS05845	0.18	-1.3
1,227,685	+		RR41_RS05845	0.18	+0.1
1,227,685	+		RR41_RS05845	0.18	-1.3
1,227,692	+		RR41_RS05845	0.19	-0.9
1,227,692	+		RR41_RS05845	0.19	-1.6
1,227,693	-		RR41_RS05845	0.19	-0.5
1,227,699	+		RR41_RS05845	0.20	-2.5
1,227,752	+		RR41_RS05845	0.26	-0.1
1,227,766	+		RR41_RS05845	0.28	-0.6
1,227,774	+		RR41_RS05845	0.29	-2.0
1,227,788	-		RR41_RS05845	0.31	+1.3
1,227,811	-		RR41_RS05845	0.34	-1.0
1,227,830	+		RR41_RS05845	0.37	+1.7
1,227,830	+		RR41_RS05845	0.37	-1.1
1,227,873	+		RR41_RS05845	0.42	+0.3
1,227,874	-		RR41_RS05845	0.42	-2.8
1,227,885	+		RR41_RS05845	0.44	-0.3
1,227,886	-		RR41_RS05845	0.44	-0.6
1,227,886	-		RR41_RS05845	0.44	+0.7
1,227,886	-		RR41_RS05845	0.44	-2.2
1,227,887	+		RR41_RS05845	0.44	+0.1
1,227,888	-		RR41_RS05845	0.44	+0.7
1,227,888	-		RR41_RS05845	0.44	+1.7
1,227,888	-		RR41_RS05845	0.44	+1.7
1,227,888	-		RR41_RS05845	0.44	-0.1
1,227,891	+		RR41_RS05845	0.44	-0.1
1,227,979	-		RR41_RS05845	0.56	-0.6
1,227,993	-		RR41_RS05845	0.58	+0.5
1,227,993	-		RR41_RS05845	0.58	-1.3
1,228,030	-		RR41_RS05845	0.62	+0.7
1,228,082	-		RR41_RS05845	0.69	-0.6
1,228,082	-		RR41_RS05845	0.69	-0.3
1,228,082	-		RR41_RS05845	0.69	-0.4
1,228,170	+		RR41_RS05845	0.80	-0.9
1,228,171	-		RR41_RS05845	0.81	-1.2
1,228,205	+		RR41_RS05845	0.85	-2.0
1,228,205	+		RR41_RS05845	0.85	-0.9
1,228,219	-		RR41_RS05845	0.87	+2.1
1,228,232	-		RR41_RS05845	0.89	+1.7
1,228,267	+				+0.5
1,228,312	-				+1.7
1,228,312	-				-0.2
1,228,385	+				-0.8
1,228,410	-				-0.9
1,228,444	-		RR41_RS05850	0.14	+0.1
1,228,444	-		RR41_RS05850	0.14	+1.3
1,228,444	-		RR41_RS05850	0.14	-2.2
1,228,478	+		RR41_RS05850	0.17	-1.9
1,228,479	-		RR41_RS05850	0.17	+0.2
1,228,479	-		RR41_RS05850	0.17	-1.6
1,228,481	+		RR41_RS05850	0.18	+0.7
1,228,485	-		RR41_RS05850	0.18	-0.6
1,228,492	-		RR41_RS05850	0.19	-1.8
1,228,492	-		RR41_RS05850	0.19	-0.3
1,228,512	-		RR41_RS05850	0.21	-0.5
1,228,535	+		RR41_RS05850	0.23	+0.3