Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS00500

Experiment: MHII_biocarbonate_serum_Chelated; 35C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MHII_biocarbonate_serum_Chelated; 35C
108,191	+		RR41_RS00495	0.24	-0.2
108,191	+		RR41_RS00495	0.24	+1.0
108,191	+		RR41_RS00495	0.24	-0.4
108,192	-		RR41_RS00495	0.24	-0.5
108,192	-		RR41_RS00495	0.24	-0.9
108,207	+		RR41_RS00495	0.25	-0.2
108,207	+		RR41_RS00495	0.25	-0.8
108,207	+		RR41_RS00495	0.25	-1.4
108,207	+		RR41_RS00495	0.25	-0.2
108,207	+		RR41_RS00495	0.25	-0.7
108,208	-		RR41_RS00495	0.26	-2.3
108,248	-		RR41_RS00495	0.29	-0.3
108,271	+		RR41_RS00495	0.31	+0.0
108,271	+		RR41_RS00495	0.31	+0.2
108,296	+		RR41_RS00495	0.33	+0.8
108,297	-		RR41_RS00495	0.33	-0.2
108,319	+		RR41_RS00495	0.35	+1.5
108,320	-		RR41_RS00495	0.35	+0.4
108,340	+		RR41_RS00495	0.37	+0.2
108,350	+		RR41_RS00495	0.37	-0.6
108,351	-		RR41_RS00495	0.38	-0.2
108,354	+		RR41_RS00495	0.38	-0.6
108,354	+		RR41_RS00495	0.38	-1.1
108,354	+		RR41_RS00495	0.38	-1.2
108,354	+		RR41_RS00495	0.38	-0.8
108,355	-		RR41_RS00495	0.38	-0.7
108,355	-		RR41_RS00495	0.38	-0.5
108,359	+		RR41_RS00495	0.38	-0.6
108,359	+		RR41_RS00495	0.38	-0.8
108,359	+		RR41_RS00495	0.38	-1.0
108,359	+		RR41_RS00495	0.38	+0.5
108,359	+		RR41_RS00495	0.38	-0.8
108,360	-		RR41_RS00495	0.38	-2.2
108,373	+		RR41_RS00495	0.39	-1.2
108,373	+		RR41_RS00495	0.39	-0.2
108,373	+		RR41_RS00495	0.39	-0.5
108,374	-		RR41_RS00495	0.39	-2.2
108,374	-		RR41_RS00495	0.39	-1.8
108,375	+		RR41_RS00495	0.40	-2.7
108,376	-		RR41_RS00495	0.40	+0.1
108,376	-		RR41_RS00495	0.40	-0.4
108,400	-		RR41_RS00495	0.42	+0.8
108,425	+		RR41_RS00495	0.44	+1.4
108,425	+		RR41_RS00495	0.44	+2.4
108,425	+		RR41_RS00495	0.44	+0.6
108,425	+		RR41_RS00495	0.44	-0.8
108,425	+		RR41_RS00495	0.44	-0.9
108,425	+		RR41_RS00495	0.44	-0.2
108,426	-		RR41_RS00495	0.44	-1.9
108,426	-		RR41_RS00495	0.44	+3.3
108,426	-		RR41_RS00495	0.44	-1.3
108,426	-		RR41_RS00495	0.44	+0.4
108,426	-		RR41_RS00495	0.44	+0.4
108,426	-		RR41_RS00495	0.44	-0.7
108,426	-		RR41_RS00495	0.44	+0.5
108,426	-		RR41_RS00495	0.44	-0.0
108,429	+		RR41_RS00495	0.44	-0.5
108,429	+		RR41_RS00495	0.44	+0.5
108,429	+		RR41_RS00495	0.44	-0.8
108,429	+		RR41_RS00495	0.44	-1.3
108,429	+		RR41_RS00495	0.44	-0.4
108,429	+		RR41_RS00495	0.44	-0.4
108,430	-		RR41_RS00495	0.44	+0.2
108,430	-		RR41_RS00495	0.44	-0.8
108,430	-		RR41_RS00495	0.44	-0.3
108,430	-		RR41_RS00495	0.44	-1.4
108,430	-		RR41_RS00495	0.44	-0.6
108,436	-		RR41_RS00495	0.45	-0.4
108,450	+		RR41_RS00495	0.46	-1.1
108,477	+		RR41_RS00495	0.48	-1.8
108,477	+		RR41_RS00495	0.48	+0.4
108,477	+		RR41_RS00495	0.48	+1.2
108,478	-		RR41_RS00495	0.48	-1.5
108,478	-		RR41_RS00495	0.48	-3.2
108,478	-		RR41_RS00495	0.48	-0.8
108,514	+		RR41_RS00495	0.51	-0.1
108,514	+		RR41_RS00495	0.51	-0.2
108,539	+		RR41_RS00495	0.53	-0.9
108,584	-		RR41_RS00495	0.57	-0.8
108,602	-		RR41_RS00495	0.58	-0.5
108,602	-		RR41_RS00495	0.58	+1.0
108,602	-		RR41_RS00495	0.58	-1.5
108,656	+		RR41_RS00495	0.63	-0.3
108,656	+		RR41_RS00495	0.63	-0.2
108,656	+		RR41_RS00495	0.63	-0.4
108,657	-		RR41_RS00495	0.63	+1.8
108,687	+		RR41_RS00495	0.66	-1.3
108,687	+		RR41_RS00495	0.66	+3.2
108,690	+		RR41_RS00495	0.66	-2.3
108,691	-		RR41_RS00495	0.66	-1.6
108,691	-		RR41_RS00495	0.66	-0.4
108,705	-		RR41_RS00495	0.67	+0.3
108,705	-		RR41_RS00495	0.67	-2.2
108,731	+		RR41_RS00495	0.69	+0.3
108,732	-		RR41_RS00495	0.69	+1.2
108,792	+		RR41_RS00495	0.74	-2.3
108,792	+		RR41_RS00495	0.74	-1.4
108,792	+		RR41_RS00495	0.74	+0.6
108,793	-		RR41_RS00495	0.74	+0.7
108,797	+		RR41_RS00495	0.75	-0.4
108,797	+		RR41_RS00495	0.75	-0.4
108,798	-		RR41_RS00495	0.75	-0.8
108,798	-		RR41_RS00495	0.75	-0.4
108,798	-		RR41_RS00495	0.75	-1.8
108,818	+		RR41_RS00495	0.77	-0.3
108,840	-		RR41_RS00495	0.78	+0.1
108,840	-		RR41_RS00495	0.78	-1.4
108,875	+		RR41_RS00495	0.81	-1.6
108,900	+		RR41_RS00495	0.83	+1.2
108,901	-		RR41_RS00495	0.83	-0.2
108,911	+		RR41_RS00495	0.84	-0.0
108,912	-		RR41_RS00495	0.84	+1.4
108,912	-		RR41_RS00495	0.84	-1.9
108,912	-		RR41_RS00495	0.84	-0.4
108,921	+		RR41_RS00495	0.85	+2.2
108,931	+		RR41_RS00495	0.86	-0.4
108,931	+		RR41_RS00495	0.86	+0.7
108,931	+		RR41_RS00495	0.86	-1.0
108,931	+		RR41_RS00495	0.86	+0.8
108,931	+		RR41_RS00495	0.86	-2.6
108,931	+		RR41_RS00495	0.86	+0.2
108,931	+		RR41_RS00495	0.86	+0.2
108,931	+		RR41_RS00495	0.86	-0.8
108,931	+		RR41_RS00495	0.86	-1.4
108,932	-		RR41_RS00495	0.86	-1.4
108,932	-		RR41_RS00495	0.86	-2.3
108,932	-		RR41_RS00495	0.86	+0.8
108,932	-		RR41_RS00495	0.86	-0.9
108,932	-		RR41_RS00495	0.86	+0.0
108,932	-		RR41_RS00495	0.86	-0.4
108,932	-		RR41_RS00495	0.86	-2.3
108,932	-		RR41_RS00495	0.86	-1.1
108,937	+		RR41_RS00495	0.86	-1.4
108,937	+		RR41_RS00495	0.86	+1.2
108,941	-		RR41_RS00495	0.87	+1.2
108,954	+		RR41_RS00495	0.88	-1.2
108,955	-		RR41_RS00495	0.88	-0.2
108,977	-		RR41_RS00495	0.90	-2.0
109,023	+				-3.1
109,056	-				-1.6
109,096	+				-1.2
109,096	+				-0.7
109,096	+				-1.3
109,096	+				-0.4
109,097	-				+1.5
109,097	-				-2.4
109,100	+				+0.9
109,100	+				+0.7
109,100	+				-0.7
109,106	+				+0.1
109,147	+				+0.3
109,149	+				+1.2
109,169	+				+0.5
109,170	-				+0.6
109,180	-				+0.2
109,182	-				-0.4
109,182	-				-0.7
109,210	-				-2.0
109,233	+				-0.8
109,233	+				-2.0
109,246	+				-0.0
109,246	+				-1.3
109,246	+				-1.6
109,247	-				+0.6
109,247	-				-0.8
109,247	-				-1.2
109,247	-				-1.2
109,247	-				+0.2
109,270	+				-1.4
109,270	+				-1.0
109,280	-				-1.4
109,280	-				-0.1
109,280	-				-1.4
109,280	-				+0.4
109,321	-		RR41_RS00500	0.11	-1.4
109,399	+		RR41_RS00500	0.17	-2.0
109,399	+		RR41_RS00500	0.17	-1.2
109,409	+		RR41_RS00500	0.18	-0.8
109,409	+		RR41_RS00500	0.18	-2.4
109,466	+		RR41_RS00500	0.22	+0.2
109,466	+		RR41_RS00500	0.22	-2.3
109,466	+		RR41_RS00500	0.22	+0.2
109,467	-		RR41_RS00500	0.22	-3.3
109,470	+		RR41_RS00500	0.22	-0.8
109,470	+		RR41_RS00500	0.22	+0.2
109,470	+		RR41_RS00500	0.22	-0.4
109,482	+		RR41_RS00500	0.23	-1.2
109,487	-		RR41_RS00500	0.23	-1.8
109,549	-		RR41_RS00500	0.28	-2.7
109,549	-		RR41_RS00500	0.28	-1.6
109,549	-		RR41_RS00500	0.28	-0.4
109,552	+		RR41_RS00500	0.28	-2.8
109,553	-		RR41_RS00500	0.28	-2.3
109,553	-		RR41_RS00500	0.28	-0.8
109,584	-		RR41_RS00500	0.31	-0.8
109,584	-		RR41_RS00500	0.31	-1.4
109,684	+		RR41_RS00500	0.38	-0.8
109,684	+		RR41_RS00500	0.38	-1.3
109,707	+		RR41_RS00500	0.40	+0.8
109,707	+		RR41_RS00500	0.40	-1.2
109,761	+		RR41_RS00500	0.44	-1.2
109,761	+		RR41_RS00500	0.44	-0.1
109,761	+		RR41_RS00500	0.44	-1.4
109,761	+		RR41_RS00500	0.44	-0.8
109,777	-		RR41_RS00500	0.45	-2.6
109,790	+		RR41_RS00500	0.46	-0.3
109,790	+		RR41_RS00500	0.46	-1.0
109,791	-		RR41_RS00500	0.46	-2.6
109,815	+		RR41_RS00500	0.48	-1.4
109,815	+		RR41_RS00500	0.48	-2.4
109,815	+		RR41_RS00500	0.48	-0.8
109,816	-		RR41_RS00500	0.48	+0.8
109,819	+		RR41_RS00500	0.48	-0.0
109,820	-		RR41_RS00500	0.48	-0.8
109,833	+		RR41_RS00500	0.49	-1.3
109,837	-		RR41_RS00500	0.49	+1.2
109,870	-		RR41_RS00500	0.52	+0.6
109,876	-		RR41_RS00500	0.52	-1.6
109,876	-		RR41_RS00500	0.52	-1.4
109,882	+		RR41_RS00500	0.53	-2.2
109,882	+		RR41_RS00500	0.53	-1.8
109,882	+		RR41_RS00500	0.53	-0.8
109,884	+		RR41_RS00500	0.53	-1.4
109,885	-		RR41_RS00500	0.53	-1.2
109,889	+		RR41_RS00500	0.53	-0.8
109,889	+		RR41_RS00500	0.53	+0.2
109,890	-		RR41_RS00500	0.53	+1.6
109,890	-		RR41_RS00500	0.53	-0.4
109,890	-		RR41_RS00500	0.53	+0.2
109,901	-		RR41_RS00500	0.54	-1.4
109,932	+		RR41_RS00500	0.56	-0.2
109,939	+		RR41_RS00500	0.57	-0.6
109,939	+		RR41_RS00500	0.57	-0.8
109,940	-		RR41_RS00500	0.57	-0.8
109,943	+		RR41_RS00500	0.57	-0.4
109,974	+		RR41_RS00500	0.59	-1.2
109,975	-		RR41_RS00500	0.59	-0.4
109,998	+		RR41_RS00500	0.61	+0.2
109,998	+		RR41_RS00500	0.61	-1.4
109,999	-		RR41_RS00500	0.61	+2.5
110,044	+		RR41_RS00500	0.64	-2.6
110,045	-		RR41_RS00500	0.65	-1.8
110,045	-		RR41_RS00500	0.65	-2.3
110,045	-		RR41_RS00500	0.65	-2.3
110,045	-		RR41_RS00500	0.65	-1.6
110,045	-		RR41_RS00500	0.65	-0.6
110,071	-		RR41_RS00500	0.66	-0.2
110,071	-		RR41_RS00500	0.66	-0.2
110,071	-		RR41_RS00500	0.66	-2.3
110,081	-		RR41_RS00500	0.67	+0.7
110,159	-		RR41_RS00500	0.73	-1.9
110,159	-		RR41_RS00500	0.73	-0.4
110,181	+		RR41_RS00500	0.75	-1.4
110,181	+		RR41_RS00500	0.75	-1.8
110,182	-		RR41_RS00500	0.75	-2.1
110,188	+		RR41_RS00500	0.75	-2.5
110,189	-		RR41_RS00500	0.75	-0.1
110,189	-		RR41_RS00500	0.75	-0.4
110,208	+		RR41_RS00500	0.77	-2.2
110,208	+		RR41_RS00500	0.77	-0.4
110,208	+		RR41_RS00500	0.77	-1.2
110,209	-		RR41_RS00500	0.77	+0.4
110,209	-		RR41_RS00500	0.77	-2.6
110,209	-		RR41_RS00500	0.77	-1.6
110,231	+		RR41_RS00500	0.78	-1.8
110,238	+		RR41_RS00500	0.79	-0.8
110,238	+		RR41_RS00500	0.79	-1.1
110,239	-		RR41_RS00500	0.79	-1.0
110,242	+		RR41_RS00500	0.79	+1.6
110,242	+		RR41_RS00500	0.79	+0.2
110,243	-		RR41_RS00500	0.79	-1.8
110,245	+		RR41_RS00500	0.79	-1.1
110,286	-		RR41_RS00500	0.82	-1.4
110,320	+		RR41_RS00500	0.85	-0.8
110,320	+		RR41_RS00500	0.85	-2.5
110,321	-		RR41_RS00500	0.85	-2.0
110,367	+		RR41_RS00500	0.88	+0.2
110,368	-		RR41_RS00500	0.88	-1.2
110,381	+		RR41_RS00500	0.89	+1.2
110,392	+				-1.2
110,466	+				+0.0
110,466	+				-3.0
110,467	-				-0.4
110,467	-				+0.2
110,467	-				-0.8
110,467	-				-0.8
110,495	-				-0.8
110,495	-				-2.0
110,522	+				-1.2
110,522	+				-1.2
110,522	+				-0.2
110,522	+				-1.2
110,522	+				-2.9
110,523	-				-1.0
110,523	-				-1.2
110,523	-				-0.4
110,523	-				-1.9
110,526	+				-0.5
110,549	-				-0.6
110,580	+				+0.2
110,587	+				-0.2
110,587	+				+0.6
110,588	-				-0.8
110,623	+		RR41_RS00505	0.12	-1.8
110,624	-		RR41_RS00505	0.12	-1.9
110,675	+		RR41_RS00505	0.20	-0.9
110,675	+		RR41_RS00505	0.20	-1.4
110,676	-		RR41_RS00505	0.20	-0.8
110,676	-		RR41_RS00505	0.20	-1.6
110,677	+		RR41_RS00505	0.20	+0.2
110,677	+		RR41_RS00505	0.20	-0.4
110,677	+		RR41_RS00505	0.20	-0.7
110,678	-		RR41_RS00505	0.20	-1.2
110,678	-		RR41_RS00505	0.20	-2.0
110,678	-		RR41_RS00505	0.20	-1.0
110,678	-		RR41_RS00505	0.20	-0.8
110,678	-		RR41_RS00505	0.20	-0.4
110,678	-		RR41_RS00505	0.20	-1.5
110,718	+		RR41_RS00505	0.26	+0.6
110,719	-		RR41_RS00505	0.26	-1.4
110,719	-		RR41_RS00505	0.26	-0.2
110,719	-		RR41_RS00505	0.26	-1.6
110,720	+		RR41_RS00505	0.26	-0.4
110,720	+		RR41_RS00505	0.26	-0.0
110,783	-		RR41_RS00505	0.35	-1.4
110,787	+		RR41_RS00505	0.35	-2.2
110,787	+		RR41_RS00505	0.35	-1.8
110,794	-		RR41_RS00505	0.36	-1.1
110,830	+		RR41_RS00505	0.41	-0.7
110,830	+		RR41_RS00505	0.41	-0.8
110,831	-		RR41_RS00505	0.41	-2.4
110,893	-		RR41_RS00505	0.50	-1.4
110,893	-		RR41_RS00505	0.50	+0.2
110,934	+		RR41_RS00505	0.56	-0.6
110,934	+		RR41_RS00505	0.56	+0.4
110,934	+		RR41_RS00505	0.56	-3.0
110,934	+		RR41_RS00505	0.56	-2.7
110,935	-		RR41_RS00505	0.56	-2.4
110,936	+		RR41_RS00505	0.56	-1.2
110,936	+		RR41_RS00505	0.56	+0.2
110,937	-		RR41_RS00505	0.56	-0.8
110,937	-		RR41_RS00505	0.56	-0.9
110,937	-		RR41_RS00505	0.56	+0.9
110,937	-		RR41_RS00505	0.56	-2.4
110,965	+		RR41_RS00505	0.60	-1.8
110,966	-		RR41_RS00505	0.60	-1.4
111,000	+		RR41_RS00505	0.65	+0.2
111,001	-		RR41_RS00505	0.65	-2.8
111,001	-		RR41_RS00505	0.65	-1.3
111,001	-		RR41_RS00505	0.65	-0.4
111,049	+		RR41_RS00505	0.72	-0.4
111,049	+		RR41_RS00505	0.72	+0.2
111,049	+		RR41_RS00505	0.72	-2.2
111,049	+		RR41_RS00505	0.72	-2.2
111,064	+		RR41_RS00505	0.74	+1.2
111,064	+		RR41_RS00505	0.74	+1.2
111,064	+		RR41_RS00505	0.74	-1.2
111,065	-		RR41_RS00505	0.74	-1.8
111,065	-		RR41_RS00505	0.74	-0.8
111,065	-		RR41_RS00505	0.74	-0.8
111,065	-		RR41_RS00505	0.74	-0.2
111,155	-		RR41_RS00505	0.87	-0.8
111,226	+				-1.2
111,231	+				+1.2
111,232	-				-1.6
111,232	-				-1.8
111,233	+				+0.2
111,233	+				-0.8
111,233	+				+0.2
111,233	+				-1.2
111,251	+				-0.4
111,252	-				-1.2
111,252	-				-0.6
111,254	+				-1.8
111,254	+				-2.3
111,254	+				-1.2
111,254	+				-2.4
111,255	-				-0.1
111,255	-				-1.3
111,286	+				-1.6
111,286	+				-1.0
111,287	-				-0.6
111,290	+				-1.7
111,290	+				-0.8
111,290	+				-0.2
111,302	-				+0.0
111,302	-				+0.1
111,302	-				-2.4
111,304	+				-2.0
111,305	-				-1.2
111,313	+				+1.8
111,314	-				-2.1
111,317	+				-0.2
111,345	+				-1.1
111,416	+				-0.7
111,444	+				+0.5
111,444	+				-0.3
111,444	+				+0.2
111,500	-				+0.3
111,502	+				-2.3