Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06130 and MPMX19_06131 are separated by 226 nucleotides MPMX19_06131 and MPMX19_06132 are separated by 121 nucleotides MPMX19_06132 and MPMX19_06133 are separated by 151 nucleotides
MPMX19_06130: MPMX19_06130 - hypothetical protein, at 317,359 to 319,071
_06130
MPMX19_06131: MPMX19_06131 - Ribose-phosphate pyrophosphokinase, at 319,298 to 320,209
_06131
MPMX19_06132: MPMX19_06132 - hypothetical protein, at 320,331 to 320,855
_06132
MPMX19_06133: MPMX19_06133 - Zinc transport protein ZntB, at 321,007 to 322,038
_06133
Position (kb) 319
320
321 Strain fitness (log2 ratio) -2
-1
0
1
2 at 318.762 kb on - strand, within MPMX19_06130 at 318.803 kb on + strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 319.307 kb on - strand at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 320.051 kb on + strand, within MPMX19_06131 at 320.175 kb on + strand at 320.175 kb on + strand at 320.176 kb on - strand at 320.176 kb on - strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.198 kb on - strand at 320.224 kb on + strand at 320.224 kb on + strand at 320.224 kb on + strand at 320.225 kb on - strand at 320.225 kb on - strand at 320.225 kb on - strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.332 kb on + strand at 320.333 kb on - strand at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.651 kb on - strand, within MPMX19_06132 at 320.651 kb on - strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 321.094 kb on + strand at 321.095 kb on - strand at 321.095 kb on - strand at 321.095 kb on - strand at 321.095 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 318,762 - MPMX19_06130 0.82 -0.4 318,803 + MPMX19_06130 0.84 -1.3 318,804 - MPMX19_06130 0.84 -1.3 318,804 - MPMX19_06130 0.84 -0.0 318,804 - MPMX19_06130 0.84 -0.7 319,307 - -0.5 319,455 + MPMX19_06131 0.17 +0.7 319,455 + MPMX19_06131 0.17 -0.3 319,455 + MPMX19_06131 0.17 +0.8 319,455 + MPMX19_06131 0.17 +0.8 319,455 + MPMX19_06131 0.17 -0.6 319,455 + MPMX19_06131 0.17 -0.9 319,455 + MPMX19_06131 0.17 -2.0 319,455 + MPMX19_06131 0.17 -0.1 319,456 - MPMX19_06131 0.17 -0.5 319,456 - MPMX19_06131 0.17 +0.6 319,456 - MPMX19_06131 0.17 -0.5 319,456 - MPMX19_06131 0.17 +1.0 319,456 - MPMX19_06131 0.17 +0.5 319,456 - MPMX19_06131 0.17 +0.7 319,923 + MPMX19_06131 0.69 -1.1 319,923 + MPMX19_06131 0.69 +0.3 319,923 + MPMX19_06131 0.69 +0.2 319,923 + MPMX19_06131 0.69 +0.1 319,923 + MPMX19_06131 0.69 -0.3 319,923 + MPMX19_06131 0.69 -0.7 319,923 + MPMX19_06131 0.69 -1.9 319,923 + MPMX19_06131 0.69 +0.1 319,923 + MPMX19_06131 0.69 -1.2 319,923 + MPMX19_06131 0.69 +0.4 319,923 + MPMX19_06131 0.69 -2.4 319,923 + MPMX19_06131 0.69 -0.7 319,923 + MPMX19_06131 0.69 +0.6 319,923 + MPMX19_06131 0.69 +1.3 319,923 + MPMX19_06131 0.69 -0.3 319,923 + MPMX19_06131 0.69 -0.3 319,923 + MPMX19_06131 0.69 +0.4 319,923 + MPMX19_06131 0.69 -2.0 319,923 + MPMX19_06131 0.69 +1.0 319,923 + MPMX19_06131 0.69 +0.8 319,923 + MPMX19_06131 0.69 +0.4 319,923 + MPMX19_06131 0.69 +0.1 319,923 + MPMX19_06131 0.69 +0.5 319,923 + MPMX19_06131 0.69 +0.2 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 +0.8 319,924 - MPMX19_06131 0.69 +0.8 319,924 - MPMX19_06131 0.69 -1.2 319,924 - MPMX19_06131 0.69 +1.2 319,924 - MPMX19_06131 0.69 +0.2 319,924 - MPMX19_06131 0.69 -0.5 319,924 - MPMX19_06131 0.69 -1.2 319,924 - MPMX19_06131 0.69 -1.3 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 -1.4 319,924 - MPMX19_06131 0.69 -1.5 319,924 - MPMX19_06131 0.69 -0.1 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 +1.3 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 -1.2 319,924 - MPMX19_06131 0.69 -1.1 319,924 - MPMX19_06131 0.69 +1.8 319,924 - MPMX19_06131 0.69 +0.2 319,924 - MPMX19_06131 0.69 -1.6 319,924 - MPMX19_06131 0.69 -0.1 319,924 - MPMX19_06131 0.69 -1.0 319,924 - MPMX19_06131 0.69 +0.5 319,924 - MPMX19_06131 0.69 -1.1 319,932 + MPMX19_06131 0.70 -1.0 319,932 + MPMX19_06131 0.70 -2.1 319,932 + MPMX19_06131 0.70 +0.7 319,932 + MPMX19_06131 0.70 -0.2 319,932 + MPMX19_06131 0.70 -0.2 319,932 + MPMX19_06131 0.70 +0.8 319,932 + MPMX19_06131 0.70 +0.0 319,932 + MPMX19_06131 0.70 +1.0 319,932 + MPMX19_06131 0.70 +0.1 319,932 + MPMX19_06131 0.70 -0.4 319,932 + MPMX19_06131 0.70 +0.3 319,932 + MPMX19_06131 0.70 +0.0 319,932 + MPMX19_06131 0.70 +0.4 319,932 + MPMX19_06131 0.70 -0.6 319,932 + MPMX19_06131 0.70 +0.8 319,932 + MPMX19_06131 0.70 -1.7 319,932 + MPMX19_06131 0.70 -1.2 319,933 - MPMX19_06131 0.70 -1.6 319,933 - MPMX19_06131 0.70 -0.7 319,933 - MPMX19_06131 0.70 -0.2 319,933 - MPMX19_06131 0.70 +0.3 319,933 - MPMX19_06131 0.70 +0.3 319,933 - MPMX19_06131 0.70 -1.1 319,933 - MPMX19_06131 0.70 -0.0 319,933 - MPMX19_06131 0.70 +0.2 319,933 - MPMX19_06131 0.70 +0.8 319,933 - MPMX19_06131 0.70 -0.4 319,933 - MPMX19_06131 0.70 -0.2 319,933 - MPMX19_06131 0.70 -1.0 320,051 + MPMX19_06131 0.83 -0.7 320,175 + +0.1 320,175 + +0.1 320,176 - -1.4 320,176 - -0.5 320,187 + -0.3 320,187 + -0.6 320,187 + +0.5 320,187 + -1.0 320,187 + -0.9 320,187 + +0.3 320,187 + -0.5 320,187 + +0.0 320,187 + +0.2 320,187 + -0.4 320,187 + +0.3 320,187 + +0.2 320,188 - -1.3 320,188 - +1.2 320,188 - -0.3 320,188 - +1.1 320,188 - -0.7 320,188 - -0.5 320,188 - -0.5 320,188 - -1.0 320,188 - -0.2 320,198 - -1.0 320,224 + -0.8 320,224 + +0.5 320,224 + +1.5 320,225 - +1.0 320,225 - -0.4 320,225 - -1.4 320,260 + +0.4 320,260 + -0.9 320,260 + -2.2 320,260 + -1.3 320,260 + -0.4 320,260 + +1.5 320,261 - -1.2 320,261 - -0.2 320,261 - +0.8 320,261 - -1.6 320,332 + -0.4 320,333 - -1.0 320,650 + MPMX19_06132 0.61 +0.8 320,650 + MPMX19_06132 0.61 +0.1 320,650 + MPMX19_06132 0.61 +0.1 320,650 + MPMX19_06132 0.61 -2.7 320,650 + MPMX19_06132 0.61 +0.4 320,651 - MPMX19_06132 0.61 +0.2 320,651 - MPMX19_06132 0.61 +0.5 320,656 + MPMX19_06132 0.62 -1.0 320,656 + MPMX19_06132 0.62 +0.0 320,656 + MPMX19_06132 0.62 +0.0 320,656 + MPMX19_06132 0.62 -1.2 320,656 + MPMX19_06132 0.62 -2.2 320,656 + MPMX19_06132 0.62 -1.6 320,656 + MPMX19_06132 0.62 -0.5 320,656 + MPMX19_06132 0.62 -0.1 320,657 - MPMX19_06132 0.62 -1.4 320,657 - MPMX19_06132 0.62 -1.0 320,657 - MPMX19_06132 0.62 +1.4 320,657 - MPMX19_06132 0.62 +0.6 320,657 - MPMX19_06132 0.62 +0.3 320,657 - MPMX19_06132 0.62 +1.0 320,657 - MPMX19_06132 0.62 +0.6 320,657 - MPMX19_06132 0.62 -0.3 320,657 - MPMX19_06132 0.62 -1.5 320,827 + +0.3 320,827 + +0.3 320,827 + +0.5 320,827 + +0.1 320,827 + -0.9 320,827 + +0.0 320,827 + -0.2 320,827 + +0.3 320,827 + -0.7 320,828 - -1.5 320,828 - +0.3 320,828 - -0.3 320,828 - +1.3 320,828 - +0.7 320,828 - +0.5 320,828 - -0.3 320,828 - -0.6 320,963 + -0.3 320,963 + -0.2 320,963 + -0.4 320,963 + -2.2 320,963 + -0.0 320,963 + -0.9 320,963 + -0.6 320,964 - -1.9 320,964 - +0.8 320,964 - +0.7 320,964 - -1.5 320,964 - -1.3 320,964 - -0.3 320,964 - -1.0 320,964 - +1.0 320,964 - -1.3 320,964 - +0.4 320,964 - -0.2 320,964 - +1.0 320,964 - +0.2 321,094 + -0.3 321,095 - +1.4 321,095 - -0.6 321,095 - +0.6 321,095 - -0.2
Or see this region's nucleotide sequence