Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05208 and MPMX19_05209 are separated by 33 nucleotides MPMX19_05209 and MPMX19_05210 are separated by 10 nucleotides
MPMX19_05208: MPMX19_05208 - hypothetical protein, at 714,597 to 734,141
_05208
MPMX19_05209: MPMX19_05209 - hypothetical protein, at 734,175 to 735,857
_05209
MPMX19_05210: MPMX19_05210 - Delta(1)-pyrroline-2-carboxylate reductase 1, at 735,868 to 736,800
_05210
Position (kb) 734
735
736 Strain fitness (log2 ratio) -2
-1
0
1 at 733.275 kb on + strand at 733.275 kb on + strand at 733.275 kb on + strand at 733.275 kb on + strand at 733.275 kb on + strand at 733.275 kb on + strand at 733.276 kb on - strand at 733.276 kb on - strand at 733.277 kb on + strand at 733.277 kb on + strand at 733.277 kb on + strand at 733.278 kb on - strand at 733.278 kb on - strand at 733.323 kb on - strand at 733.350 kb on + strand at 733.350 kb on + strand at 733.350 kb on + strand at 733.350 kb on + strand at 733.350 kb on + strand at 733.351 kb on - strand at 733.351 kb on - strand at 733.351 kb on - strand at 733.453 kb on - strand at 733.497 kb on - strand at 733.524 kb on + strand at 733.525 kb on - strand at 733.525 kb on - strand at 733.525 kb on - strand at 733.525 kb on - strand at 733.525 kb on - strand at 733.528 kb on + strand at 733.528 kb on + strand at 733.528 kb on + strand at 733.529 kb on - strand at 733.529 kb on - strand at 733.529 kb on - strand at 733.529 kb on - strand at 733.608 kb on + strand at 733.608 kb on + strand at 733.608 kb on + strand at 733.608 kb on + strand at 733.616 kb on + strand at 733.617 kb on - strand at 733.617 kb on - strand at 733.617 kb on - strand at 733.680 kb on + strand at 733.680 kb on + strand at 733.680 kb on + strand at 733.680 kb on + strand at 733.680 kb on + strand at 733.681 kb on - strand at 733.681 kb on - strand at 733.821 kb on - strand at 733.956 kb on + strand at 733.956 kb on + strand at 733.957 kb on - strand at 733.957 kb on - strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.976 kb on + strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 733.977 kb on - strand at 734.238 kb on + strand at 734.391 kb on + strand, within MPMX19_05209 at 734.391 kb on + strand, within MPMX19_05209 at 734.392 kb on - strand, within MPMX19_05209 at 734.436 kb on + strand, within MPMX19_05209 at 734.436 kb on + strand, within MPMX19_05209 at 734.436 kb on + strand, within MPMX19_05209 at 734.436 kb on + strand, within MPMX19_05209 at 734.437 kb on - strand, within MPMX19_05209 at 734.437 kb on - strand, within MPMX19_05209 at 734.487 kb on + strand, within MPMX19_05209 at 734.487 kb on + strand, within MPMX19_05209 at 734.487 kb on + strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.488 kb on - strand, within MPMX19_05209 at 734.560 kb on - strand, within MPMX19_05209 at 734.560 kb on - strand, within MPMX19_05209 at 734.994 kb on + strand, within MPMX19_05209 at 735.003 kb on + strand, within MPMX19_05209 at 735.004 kb on - strand, within MPMX19_05209 at 735.062 kb on + strand, within MPMX19_05209 at 735.062 kb on + strand, within MPMX19_05209 at 735.062 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.246 kb on + strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.247 kb on - strand, within MPMX19_05209 at 735.375 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.447 kb on + strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.448 kb on - strand, within MPMX19_05209 at 735.450 kb on + strand, within MPMX19_05209 at 735.450 kb on + strand, within MPMX19_05209 at 735.450 kb on + strand, within MPMX19_05209 at 735.450 kb on + strand, within MPMX19_05209 at 735.451 kb on - strand, within MPMX19_05209 at 735.547 kb on + strand, within MPMX19_05209 at 735.547 kb on + strand, within MPMX19_05209 at 735.548 kb on - strand, within MPMX19_05209 at 735.548 kb on - strand, within MPMX19_05209 at 735.648 kb on + strand, within MPMX19_05209 at 735.648 kb on + strand, within MPMX19_05209 at 735.648 kb on + strand, within MPMX19_05209 at 735.648 kb on + strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.649 kb on - strand, within MPMX19_05209 at 735.675 kb on + strand, within MPMX19_05209 at 735.675 kb on + strand, within MPMX19_05209 at 735.675 kb on + strand, within MPMX19_05209 at 735.676 kb on - strand, within MPMX19_05209 at 735.676 kb on - strand, within MPMX19_05209 at 735.696 kb on + strand at 735.696 kb on + strand at 735.696 kb on + strand at 735.696 kb on + strand at 735.696 kb on + strand at 735.696 kb on + strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.697 kb on - strand at 735.810 kb on + strand at 735.810 kb on + strand at 735.855 kb on + strand at 735.855 kb on + strand at 735.855 kb on + strand at 735.855 kb on + strand at 735.856 kb on - strand at 735.856 kb on - strand at 735.856 kb on - strand at 735.856 kb on - strand at 735.856 kb on - strand at 736.115 kb on + strand, within MPMX19_05210 at 736.115 kb on + strand, within MPMX19_05210 at 736.115 kb on + strand, within MPMX19_05210 at 736.116 kb on - strand, within MPMX19_05210 at 736.116 kb on - strand, within MPMX19_05210 at 736.116 kb on - strand, within MPMX19_05210 at 736.185 kb on - strand, within MPMX19_05210 at 736.185 kb on - strand, within MPMX19_05210 at 736.185 kb on - strand, within MPMX19_05210 at 736.237 kb on + strand, within MPMX19_05210 at 736.237 kb on + strand, within MPMX19_05210 at 736.237 kb on + strand, within MPMX19_05210 at 736.238 kb on - strand, within MPMX19_05210 at 736.238 kb on - strand, within MPMX19_05210 at 736.347 kb on - strand, within MPMX19_05210 at 736.373 kb on + strand, within MPMX19_05210 at 736.373 kb on + strand, within MPMX19_05210 at 736.374 kb on - strand, within MPMX19_05210 at 736.374 kb on - strand, within MPMX19_05210 at 736.374 kb on - strand, within MPMX19_05210 at 736.374 kb on - strand, within MPMX19_05210 at 736.374 kb on - strand, within MPMX19_05210 at 736.526 kb on + strand, within MPMX19_05210 at 736.526 kb on + strand, within MPMX19_05210 at 736.526 kb on + strand, within MPMX19_05210 at 736.527 kb on - strand, within MPMX19_05210 at 736.527 kb on - strand, within MPMX19_05210 at 736.527 kb on - strand, within MPMX19_05210 at 736.700 kb on + strand, within MPMX19_05210 at 736.700 kb on + strand, within MPMX19_05210 at 736.701 kb on - strand, within MPMX19_05210 at 736.846 kb on + strand at 736.846 kb on + strand at 736.846 kb on + strand at 736.846 kb on + strand at 736.846 kb on + strand at 736.846 kb on + strand at 736.846 kb on + strand at 736.847 kb on - strand at 736.847 kb on - strand at 736.847 kb on - strand at 736.847 kb on - strand at 736.847 kb on - strand at 736.847 kb on - strand at 736.848 kb on + strand at 736.849 kb on - strand at 736.849 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 733,275 + +0.4 733,275 + -0.9 733,275 + -1.1 733,275 + -0.3 733,275 + -0.1 733,275 + -0.0 733,276 - -2.6 733,276 - -0.1 733,277 + -0.2 733,277 + +0.6 733,277 + +0.1 733,278 - +0.1 733,278 - +0.2 733,323 - -1.0 733,350 + +0.0 733,350 + -0.5 733,350 + -1.1 733,350 + +0.3 733,350 + -0.1 733,351 - +1.0 733,351 - -1.6 733,351 - -0.9 733,453 - +0.1 733,497 - +0.1 733,524 + +1.3 733,525 - -1.6 733,525 - -1.0 733,525 - -1.9 733,525 - -0.1 733,525 - -0.2 733,528 + -1.2 733,528 + -0.7 733,528 + +1.2 733,529 - -0.6 733,529 - -1.4 733,529 - -0.5 733,529 - -0.7 733,608 + +0.7 733,608 + +0.3 733,608 + -0.2 733,608 + -1.6 733,616 + -0.1 733,617 - +1.1 733,617 - -0.9 733,617 - -1.4 733,680 + -0.6 733,680 + +0.7 733,680 + -0.2 733,680 + -0.8 733,680 + -0.4 733,681 - +0.7 733,681 - -1.1 733,821 - -0.4 733,956 + +0.5 733,956 + +0.3 733,957 - +0.4 733,957 - +0.4 733,976 + -0.3 733,976 + -0.5 733,976 + +0.7 733,976 + -0.2 733,976 + -0.5 733,976 + -0.8 733,976 + +0.4 733,976 + -0.3 733,977 - -0.9 733,977 - -0.2 733,977 - -0.2 733,977 - +0.4 733,977 - +0.9 733,977 - +0.9 733,977 - +0.3 733,977 - +0.4 733,977 - -0.5 733,977 - +0.4 733,977 - +0.7 733,977 - +0.1 733,977 - +0.2 734,238 + -0.0 734,391 + MPMX19_05209 0.13 +0.5 734,391 + MPMX19_05209 0.13 +1.7 734,392 - MPMX19_05209 0.13 +0.9 734,436 + MPMX19_05209 0.16 +0.8 734,436 + MPMX19_05209 0.16 -1.5 734,436 + MPMX19_05209 0.16 +0.7 734,436 + MPMX19_05209 0.16 -0.3 734,437 - MPMX19_05209 0.16 -0.8 734,437 - MPMX19_05209 0.16 -1.0 734,487 + MPMX19_05209 0.19 +0.4 734,487 + MPMX19_05209 0.19 +0.5 734,487 + MPMX19_05209 0.19 -0.9 734,488 - MPMX19_05209 0.19 -0.8 734,488 - MPMX19_05209 0.19 -1.1 734,488 - MPMX19_05209 0.19 -0.0 734,488 - MPMX19_05209 0.19 -1.1 734,488 - MPMX19_05209 0.19 -1.0 734,488 - MPMX19_05209 0.19 -0.8 734,488 - MPMX19_05209 0.19 -1.1 734,488 - MPMX19_05209 0.19 -0.8 734,560 - MPMX19_05209 0.23 -1.6 734,560 - MPMX19_05209 0.23 +0.4 734,994 + MPMX19_05209 0.49 -1.5 735,003 + MPMX19_05209 0.49 -0.6 735,004 - MPMX19_05209 0.49 +0.4 735,062 + MPMX19_05209 0.53 -1.4 735,062 + MPMX19_05209 0.53 -0.6 735,062 + MPMX19_05209 0.53 -0.5 735,246 + MPMX19_05209 0.64 +0.9 735,246 + MPMX19_05209 0.64 -1.3 735,246 + MPMX19_05209 0.64 +0.3 735,246 + MPMX19_05209 0.64 -0.9 735,246 + MPMX19_05209 0.64 -0.2 735,246 + MPMX19_05209 0.64 +0.1 735,246 + MPMX19_05209 0.64 -0.3 735,246 + MPMX19_05209 0.64 +0.4 735,246 + MPMX19_05209 0.64 -1.3 735,246 + MPMX19_05209 0.64 -0.2 735,246 + MPMX19_05209 0.64 +0.7 735,246 + MPMX19_05209 0.64 -0.6 735,246 + MPMX19_05209 0.64 +0.5 735,246 + MPMX19_05209 0.64 -1.0 735,246 + MPMX19_05209 0.64 +1.7 735,246 + MPMX19_05209 0.64 -1.9 735,246 + MPMX19_05209 0.64 -0.7 735,246 + MPMX19_05209 0.64 +0.1 735,246 + MPMX19_05209 0.64 -1.6 735,247 - MPMX19_05209 0.64 -1.1 735,247 - MPMX19_05209 0.64 +0.5 735,247 - MPMX19_05209 0.64 +0.4 735,247 - MPMX19_05209 0.64 -0.5 735,247 - MPMX19_05209 0.64 +0.1 735,247 - MPMX19_05209 0.64 -1.6 735,247 - MPMX19_05209 0.64 +0.8 735,247 - MPMX19_05209 0.64 -1.2 735,247 - MPMX19_05209 0.64 +1.0 735,247 - MPMX19_05209 0.64 -1.3 735,247 - MPMX19_05209 0.64 -1.3 735,247 - MPMX19_05209 0.64 +0.1 735,247 - MPMX19_05209 0.64 -0.2 735,247 - MPMX19_05209 0.64 -0.6 735,375 + MPMX19_05209 0.71 -1.5 735,447 + MPMX19_05209 0.76 -1.1 735,447 + MPMX19_05209 0.76 -0.6 735,447 + MPMX19_05209 0.76 -0.8 735,447 + MPMX19_05209 0.76 -1.1 735,447 + MPMX19_05209 0.76 -2.1 735,447 + MPMX19_05209 0.76 +0.1 735,447 + MPMX19_05209 0.76 -0.8 735,448 - MPMX19_05209 0.76 +0.1 735,448 - MPMX19_05209 0.76 -0.6 735,448 - MPMX19_05209 0.76 -0.9 735,448 - MPMX19_05209 0.76 +1.4 735,448 - MPMX19_05209 0.76 +0.6 735,448 - MPMX19_05209 0.76 -0.9 735,448 - MPMX19_05209 0.76 +0.1 735,448 - MPMX19_05209 0.76 -1.0 735,450 + MPMX19_05209 0.76 -1.6 735,450 + MPMX19_05209 0.76 +0.0 735,450 + MPMX19_05209 0.76 -0.2 735,450 + MPMX19_05209 0.76 +0.4 735,451 - MPMX19_05209 0.76 -0.2 735,547 + MPMX19_05209 0.82 -0.2 735,547 + MPMX19_05209 0.82 +1.7 735,548 - MPMX19_05209 0.82 -0.4 735,548 - MPMX19_05209 0.82 -1.2 735,648 + MPMX19_05209 0.88 -1.6 735,648 + MPMX19_05209 0.88 -1.2 735,648 + MPMX19_05209 0.88 -0.1 735,648 + MPMX19_05209 0.88 +0.4 735,649 - MPMX19_05209 0.88 +0.5 735,649 - MPMX19_05209 0.88 -0.9 735,649 - MPMX19_05209 0.88 -0.5 735,649 - MPMX19_05209 0.88 -1.1 735,649 - MPMX19_05209 0.88 -1.3 735,649 - MPMX19_05209 0.88 -1.6 735,649 - MPMX19_05209 0.88 -0.5 735,649 - MPMX19_05209 0.88 -0.6 735,675 + MPMX19_05209 0.89 +0.8 735,675 + MPMX19_05209 0.89 +0.5 735,675 + MPMX19_05209 0.89 +0.5 735,676 - MPMX19_05209 0.89 -1.1 735,676 - MPMX19_05209 0.89 -0.9 735,696 + -0.9 735,696 + -0.5 735,696 + +0.6 735,696 + +0.4 735,696 + -0.4 735,696 + -0.1 735,697 - +0.1 735,697 - -0.3 735,697 - -0.1 735,697 - +0.4 735,697 - -0.9 735,697 - -1.3 735,697 - -1.5 735,697 - -0.1 735,697 - +0.4 735,697 - -0.3 735,810 + -1.1 735,810 + +0.1 735,855 + +0.5 735,855 + -0.6 735,855 + +1.4 735,855 + -0.9 735,856 - +1.0 735,856 - -0.8 735,856 - -0.6 735,856 - -0.2 735,856 - -0.1 736,115 + MPMX19_05210 0.26 +0.9 736,115 + MPMX19_05210 0.26 +1.0 736,115 + MPMX19_05210 0.26 +0.1 736,116 - MPMX19_05210 0.27 -0.8 736,116 - MPMX19_05210 0.27 -0.3 736,116 - MPMX19_05210 0.27 -0.1 736,185 - MPMX19_05210 0.34 -1.2 736,185 - MPMX19_05210 0.34 -0.0 736,185 - MPMX19_05210 0.34 +0.1 736,237 + MPMX19_05210 0.40 +0.7 736,237 + MPMX19_05210 0.40 -1.1 736,237 + MPMX19_05210 0.40 -1.9 736,238 - MPMX19_05210 0.40 -0.7 736,238 - MPMX19_05210 0.40 +0.7 736,347 - MPMX19_05210 0.51 -0.1 736,373 + MPMX19_05210 0.54 -1.6 736,373 + MPMX19_05210 0.54 +0.2 736,374 - MPMX19_05210 0.54 +0.1 736,374 - MPMX19_05210 0.54 -1.0 736,374 - MPMX19_05210 0.54 +0.8 736,374 - MPMX19_05210 0.54 +1.3 736,374 - MPMX19_05210 0.54 -1.0 736,526 + MPMX19_05210 0.71 -0.1 736,526 + MPMX19_05210 0.71 -0.9 736,526 + MPMX19_05210 0.71 -0.4 736,527 - MPMX19_05210 0.71 -0.0 736,527 - MPMX19_05210 0.71 -0.6 736,527 - MPMX19_05210 0.71 +0.7 736,700 + MPMX19_05210 0.89 -0.6 736,700 + MPMX19_05210 0.89 +0.1 736,701 - MPMX19_05210 0.89 -0.4 736,846 + +0.9 736,846 + -1.6 736,846 + -0.2 736,846 + +0.6 736,846 + -1.3 736,846 + -1.1 736,846 + -0.3 736,847 - -0.7 736,847 - -0.3 736,847 - +0.1 736,847 - -0.9 736,847 - +0.1 736,847 - -0.8 736,848 + -0.4 736,849 - -0.4 736,849 - -0.8
Or see this region's nucleotide sequence