Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03602

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,030,681	+				+0.8
1,030,682	-				-2.1
1,030,684	+				-1.8
1,030,685	-				-1.4
1,030,685	-				+1.7
1,030,685	-				-1.2
1,030,718	+				-1.0
1,030,718	+				-0.3
1,030,718	+				-0.9
1,030,718	+				-0.6
1,030,718	+				+0.0
1,030,718	+				-0.4
1,030,718	+				-1.0
1,030,718	+				-0.5
1,030,719	-				+0.3
1,030,719	-				+0.0
1,030,719	-				-1.3
1,030,719	-				-1.2
1,030,719	-				+0.1
1,030,719	-				+0.4
1,030,719	-				-1.3
1,030,719	-				+0.3
1,030,719	-				-2.1
1,030,731	+				-0.9
1,030,731	+				-2.4
1,030,731	+				-0.3
1,030,732	-				-0.3
1,030,732	-				-0.9
1,030,732	-				-0.5
1,030,732	-				-0.7
1,030,732	-				+1.1
1,030,775	+				+0.7
1,031,057	+		MPMX19_03601	0.44	+0.1
1,031,058	-		MPMX19_03601	0.44	-1.5
1,031,309	+		MPMX19_03601	0.80	+0.1
1,031,309	+		MPMX19_03601	0.80	-1.4
1,031,309	+		MPMX19_03601	0.80	-0.9
1,031,309	+		MPMX19_03601	0.80	-1.9
1,031,309	+		MPMX19_03601	0.80	-2.1
1,031,310	-		MPMX19_03601	0.80	+1.1
1,031,310	-		MPMX19_03601	0.80	-1.1
1,031,310	-		MPMX19_03601	0.80	-0.9
1,031,310	-		MPMX19_03601	0.80	-0.9
1,031,312	+		MPMX19_03601	0.80	+0.1
1,031,312	+		MPMX19_03601	0.80	+0.7
1,031,312	+		MPMX19_03601	0.80	+0.1
1,031,313	-		MPMX19_03601	0.80	-0.4
1,031,313	-		MPMX19_03601	0.80	+0.1
1,031,313	-		MPMX19_03601	0.80	-0.2
1,031,313	-		MPMX19_03601	0.80	-1.0
1,031,313	-		MPMX19_03601	0.80	-0.8
1,031,476	+				-0.7
1,031,477	-				+0.1
1,031,571	+		MPMX19_03602	0.13	+1.4
1,031,571	+		MPMX19_03602	0.13	-0.1
1,031,571	+		MPMX19_03602	0.13	-2.1
1,031,571	+		MPMX19_03602	0.13	-0.2
1,031,571	+		MPMX19_03602	0.13	-0.3
1,031,571	+		MPMX19_03602	0.13	+0.3
1,031,571	+		MPMX19_03602	0.13	+0.2
1,031,571	+		MPMX19_03602	0.13	-1.3
1,031,571	+		MPMX19_03602	0.13	-0.5
1,031,572	-		MPMX19_03602	0.13	-1.2
1,031,572	-		MPMX19_03602	0.13	+0.4
1,031,572	-		MPMX19_03602	0.13	-0.1
1,031,572	-		MPMX19_03602	0.13	-0.1
1,031,572	-		MPMX19_03602	0.13	-1.1
1,031,572	-		MPMX19_03602	0.13	-1.3
1,031,572	-		MPMX19_03602	0.13	+0.4
1,031,572	-		MPMX19_03602	0.13	+0.6
1,031,572	-		MPMX19_03602	0.13	-0.1
1,031,606	+		MPMX19_03602	0.17	-1.0
1,031,607	+		MPMX19_03602	0.17	-0.8
1,031,607	+		MPMX19_03602	0.17	-0.1
1,031,607	+		MPMX19_03602	0.17	-0.4
1,031,607	+		MPMX19_03602	0.17	-0.1
1,031,607	+		MPMX19_03602	0.17	-0.4
1,031,607	+		MPMX19_03602	0.17	-0.5
1,031,607	+		MPMX19_03602	0.17	-1.9
1,031,608	-		MPMX19_03602	0.17	-0.3
1,031,608	-		MPMX19_03602	0.17	-0.9
1,031,608	-		MPMX19_03602	0.17	+0.1
1,031,608	-		MPMX19_03602	0.17	-0.4
1,031,608	-		MPMX19_03602	0.17	-1.5
1,031,608	-		MPMX19_03602	0.17	+0.4
1,031,670	+		MPMX19_03602	0.25	-0.9
1,031,670	+		MPMX19_03602	0.25	+0.7
1,031,671	-		MPMX19_03602	0.25	-0.3
1,031,671	-		MPMX19_03602	0.25	-1.1
1,031,787	+		MPMX19_03602	0.39	+0.1
1,031,787	+		MPMX19_03602	0.39	+0.4
1,031,787	+		MPMX19_03602	0.39	-0.7
1,031,787	+		MPMX19_03602	0.39	+0.4
1,031,788	-		MPMX19_03602	0.39	-0.3
1,031,788	-		MPMX19_03602	0.39	+0.1
1,031,788	-		MPMX19_03602	0.39	-0.2
1,031,877	+		MPMX19_03602	0.50	-1.7
1,031,877	+		MPMX19_03602	0.50	+0.7
1,031,878	-		MPMX19_03602	0.50	-1.5
1,031,878	-		MPMX19_03602	0.50	-0.3
1,031,878	-		MPMX19_03602	0.50	+0.5
1,031,920	+		MPMX19_03602	0.55	-1.4
1,031,920	+		MPMX19_03602	0.55	+0.1
1,031,921	-		MPMX19_03602	0.55	-1.7
1,031,921	-		MPMX19_03602	0.55	-0.6
1,031,970	+		MPMX19_03602	0.61	+0.5
1,031,970	+		MPMX19_03602	0.61	-0.7
1,031,970	+		MPMX19_03602	0.61	+0.7
1,031,970	+		MPMX19_03602	0.61	-0.1
1,031,971	-		MPMX19_03602	0.61	-0.5
1,031,971	-		MPMX19_03602	0.61	-0.9
1,031,971	-		MPMX19_03602	0.61	-1.7
1,031,971	-		MPMX19_03602	0.61	-0.7
1,031,971	-		MPMX19_03602	0.61	-0.4
1,031,971	-		MPMX19_03602	0.61	+0.3
1,031,971	-		MPMX19_03602	0.61	-1.4
1,031,971	-		MPMX19_03602	0.61	+1.5
1,032,220	-				-0.4
1,032,220	-				+0.1
1,032,261	+				-0.3
1,032,261	+				-1.3
1,032,261	+				-0.9
1,032,261	+				+1.1
1,032,261	+				-0.4
1,032,261	+				-0.3
1,032,262	-				-0.6
1,032,262	-				-1.4
1,032,262	-				-0.4
1,032,262	-				-0.7
1,032,262	-				-3.4
1,032,262	-				+1.3
1,032,571	+		MPMX19_03603	0.29	-0.3
1,032,571	+		MPMX19_03603	0.29	-0.8
1,032,571	+		MPMX19_03603	0.29	+2.0
1,032,571	+		MPMX19_03603	0.29	-1.1
1,032,572	-		MPMX19_03603	0.29	+0.6
1,032,657	+		MPMX19_03603	0.38	-0.2
1,032,657	+		MPMX19_03603	0.38	+1.1
1,032,657	+		MPMX19_03603	0.38	-1.4
1,032,657	+		MPMX19_03603	0.38	+1.3
1,032,657	+		MPMX19_03603	0.38	-0.3
1,032,657	+		MPMX19_03603	0.38	-1.3
1,032,658	-		MPMX19_03603	0.38	-0.5
1,032,658	-		MPMX19_03603	0.38	+1.5
1,032,658	-		MPMX19_03603	0.38	-0.3
1,032,658	-		MPMX19_03603	0.38	-0.1
1,032,658	-		MPMX19_03603	0.38	+1.5
1,032,658	-		MPMX19_03603	0.38	+0.7
1,032,658	-		MPMX19_03603	0.38	+1.3
1,032,658	-		MPMX19_03603	0.38	-0.4
1,032,658	-		MPMX19_03603	0.38	-0.9
1,032,886	-		MPMX19_03603	0.62	+0.1
1,032,886	-		MPMX19_03603	0.62	-0.3
1,032,937	-		MPMX19_03603	0.67	-1.1
1,032,954	+		MPMX19_03603	0.69	-1.2
1,032,954	+		MPMX19_03603	0.69	+0.6
1,032,955	-		MPMX19_03603	0.69	-0.3
1,032,955	-		MPMX19_03603	0.69	+1.1
1,032,993	+		MPMX19_03603	0.73	+0.1
1,032,993	+		MPMX19_03603	0.73	+0.2
1,032,993	+		MPMX19_03603	0.73	-0.8
1,032,993	+		MPMX19_03603	0.73	-0.7
1,032,993	+		MPMX19_03603	0.73	-1.5
1,032,993	+		MPMX19_03603	0.73	-0.3
1,032,994	-		MPMX19_03603	0.73	-1.5
1,032,994	-		MPMX19_03603	0.73	-1.2
1,033,018	-		MPMX19_03603	0.76	+0.4
1,033,035	+		MPMX19_03603	0.77	+0.3
1,033,036	-		MPMX19_03603	0.78	-0.4
1,033,036	-		MPMX19_03603	0.78	+0.1
1,033,122	+		MPMX19_03603	0.87	+0.3
1,033,122	+		MPMX19_03603	0.87	-0.3
1,033,123	-		MPMX19_03603	0.87	+0.1
1,033,123	-		MPMX19_03603	0.87	-0.6
1,033,123	-		MPMX19_03603	0.87	+0.2