Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02651

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,765,475	-		MPMX19_02650	0.36	+0.9
2,765,475	-		MPMX19_02650	0.36	-0.7
2,765,475	-		MPMX19_02650	0.36	+0.7
2,765,893	+		MPMX19_02650	0.71	+0.4
2,765,893	+		MPMX19_02650	0.71	-1.0
2,765,953	+		MPMX19_02650	0.76	-0.1
2,765,953	+		MPMX19_02650	0.76	+0.5
2,765,953	+		MPMX19_02650	0.76	-0.3
2,765,953	+		MPMX19_02650	0.76	-0.4
2,765,953	+		MPMX19_02650	0.76	-0.1
2,765,954	-		MPMX19_02650	0.76	+0.3
2,765,954	-		MPMX19_02650	0.76	-0.3
2,765,954	-		MPMX19_02650	0.76	+0.3
2,765,954	-		MPMX19_02650	0.76	-1.5
2,765,954	-		MPMX19_02650	0.76	-0.1
2,766,295	+				-0.4
2,766,296	-				-0.3
2,766,296	-				-0.9
2,766,296	-				-0.0
2,766,296	-				+0.2
2,766,448	+		MPMX19_02651	0.33	-0.1
2,766,448	+		MPMX19_02651	0.33	+1.2
2,766,448	+		MPMX19_02651	0.33	-0.2
2,766,448	+		MPMX19_02651	0.33	-1.1
2,766,448	+		MPMX19_02651	0.33	+1.5
2,766,448	+		MPMX19_02651	0.33	-1.0
2,766,448	+		MPMX19_02651	0.33	-0.9
2,766,448	+		MPMX19_02651	0.33	+0.2
2,766,448	+		MPMX19_02651	0.33	-1.0
2,766,448	+		MPMX19_02651	0.33	-0.2
2,766,448	+		MPMX19_02651	0.33	+1.2
2,766,449	-		MPMX19_02651	0.33	-2.9
2,766,449	-		MPMX19_02651	0.33	+0.1
2,766,449	-		MPMX19_02651	0.33	-0.2
2,766,449	-		MPMX19_02651	0.33	-1.7
2,766,449	-		MPMX19_02651	0.33	+1.1
2,766,449	-		MPMX19_02651	0.33	+0.5
2,766,449	-		MPMX19_02651	0.33	-1.2
2,766,449	-		MPMX19_02651	0.33	-1.2
2,766,449	-		MPMX19_02651	0.33	-0.5
2,766,449	-		MPMX19_02651	0.33	-2.1
2,766,449	-		MPMX19_02651	0.33	-0.1
2,766,449	-		MPMX19_02651	0.33	-1.1
2,766,449	-		MPMX19_02651	0.33	-0.1
2,766,449	-		MPMX19_02651	0.33	+0.8
2,766,449	-		MPMX19_02651	0.33	-0.8
2,766,449	-		MPMX19_02651	0.33	+0.1
2,766,553	+		MPMX19_02651	0.55	-0.1
2,766,554	-		MPMX19_02651	0.55	-2.1
2,766,577	+		MPMX19_02651	0.60	+0.9
2,766,577	+		MPMX19_02651	0.60	-0.1
2,766,577	+		MPMX19_02651	0.60	-1.8
2,766,577	+		MPMX19_02651	0.60	+0.9
2,766,577	+		MPMX19_02651	0.60	-0.1
2,766,577	+		MPMX19_02651	0.60	-0.4
2,766,577	+		MPMX19_02651	0.60	-0.6
2,766,577	+		MPMX19_02651	0.60	+0.3
2,766,577	+		MPMX19_02651	0.60	-1.0
2,766,577	+		MPMX19_02651	0.60	-0.4
2,766,577	+		MPMX19_02651	0.60	-0.5
2,766,577	+		MPMX19_02651	0.60	+0.3
2,766,577	+		MPMX19_02651	0.60	+0.3
2,766,577	+		MPMX19_02651	0.60	+0.1
2,766,577	+		MPMX19_02651	0.60	-0.7
2,766,577	+		MPMX19_02651	0.60	+1.2
2,766,577	+		MPMX19_02651	0.60	-0.3
2,766,577	+		MPMX19_02651	0.60	+0.2
2,766,577	+		MPMX19_02651	0.60	+0.5
2,766,577	+		MPMX19_02651	0.60	+0.3
2,766,577	+		MPMX19_02651	0.60	-0.4
2,766,577	+		MPMX19_02651	0.60	-1.8
2,766,577	+		MPMX19_02651	0.60	-0.1
2,766,577	+		MPMX19_02651	0.60	-0.1
2,766,577	+		MPMX19_02651	0.60	-0.8
2,766,577	+		MPMX19_02651	0.60	-0.2
2,766,578	-		MPMX19_02651	0.60	+0.8
2,766,578	-		MPMX19_02651	0.60	-1.1
2,766,578	-		MPMX19_02651	0.60	+0.6
2,766,578	-		MPMX19_02651	0.60	+1.9
2,766,578	-		MPMX19_02651	0.60	+0.9
2,766,578	-		MPMX19_02651	0.60	-0.7
2,766,578	-		MPMX19_02651	0.60	-0.9
2,766,578	-		MPMX19_02651	0.60	-0.2
2,766,578	-		MPMX19_02651	0.60	+0.6
2,766,578	-		MPMX19_02651	0.60	+0.3
2,766,578	-		MPMX19_02651	0.60	+0.7
2,766,578	-		MPMX19_02651	0.60	-0.8
2,766,578	-		MPMX19_02651	0.60	-1.1
2,766,578	-		MPMX19_02651	0.60	+0.3
2,766,578	-		MPMX19_02651	0.60	-0.7
2,766,578	-		MPMX19_02651	0.60	+2.5
2,766,578	-		MPMX19_02651	0.60	+0.3
2,766,578	-		MPMX19_02651	0.60	+0.6
2,766,578	-		MPMX19_02651	0.60	-1.9
2,766,740	+				+0.2
2,766,740	+				+2.5
2,766,741	-				-0.3
2,766,756	-				-1.3
2,766,840	+				-0.4
2,766,861	+				+0.0
2,766,862	-				-0.1
2,766,862	-				+0.1
2,766,862	-				-0.7
2,766,987	+		MPMX19_02652	0.21	-0.2
2,766,987	+		MPMX19_02652	0.21	-0.7
2,766,987	+		MPMX19_02652	0.21	-0.2
2,766,987	+		MPMX19_02652	0.21	+0.7
2,766,987	+		MPMX19_02652	0.21	+0.3
2,766,987	+		MPMX19_02652	0.21	-2.8
2,766,987	+		MPMX19_02652	0.21	-0.2
2,766,987	+		MPMX19_02652	0.21	+0.2
2,766,987	+		MPMX19_02652	0.21	-2.2
2,766,987	+		MPMX19_02652	0.21	+1.4
2,766,987	+		MPMX19_02652	0.21	+0.3
2,766,987	+		MPMX19_02652	0.21	+0.3
2,766,987	+		MPMX19_02652	0.21	+0.2
2,766,987	+		MPMX19_02652	0.21	-0.5
2,766,987	+		MPMX19_02652	0.21	+0.8
2,766,987	+		MPMX19_02652	0.21	-1.1
2,766,988	-		MPMX19_02652	0.21	-0.4
2,766,988	-		MPMX19_02652	0.21	-0.4
2,766,988	-		MPMX19_02652	0.21	-0.6
2,766,988	-		MPMX19_02652	0.21	-1.3
2,766,988	-		MPMX19_02652	0.21	+0.3
2,766,988	-		MPMX19_02652	0.21	-0.2
2,766,988	-		MPMX19_02652	0.21	-1.5
2,766,988	-		MPMX19_02652	0.21	-0.6
2,766,988	-		MPMX19_02652	0.21	-1.4
2,766,988	-		MPMX19_02652	0.21	-0.1
2,766,988	-		MPMX19_02652	0.21	-0.9
2,766,988	-		MPMX19_02652	0.21	+0.6
2,766,988	-		MPMX19_02652	0.21	-0.5
2,766,988	-		MPMX19_02652	0.21	+0.2
2,766,988	-		MPMX19_02652	0.21	-1.3
2,766,988	-		MPMX19_02652	0.21	-1.1
2,766,988	-		MPMX19_02652	0.21	-1.2
2,766,988	-		MPMX19_02652	0.21	-0.9
2,767,386	+		MPMX19_02652	0.67	+0.2
2,767,386	+		MPMX19_02652	0.67	+0.3
2,767,386	+		MPMX19_02652	0.67	+0.3
2,767,386	+		MPMX19_02652	0.67	-0.6
2,767,386	+		MPMX19_02652	0.67	-2.0
2,767,386	+		MPMX19_02652	0.67	-0.7
2,767,386	+		MPMX19_02652	0.67	-0.3
2,767,386	+		MPMX19_02652	0.67	-0.5
2,767,386	+		MPMX19_02652	0.67	-0.7
2,767,386	+		MPMX19_02652	0.67	+1.5
2,767,386	+		MPMX19_02652	0.67	-1.5
2,767,386	+		MPMX19_02652	0.67	-1.4
2,767,387	-		MPMX19_02652	0.67	-1.4
2,767,387	-		MPMX19_02652	0.67	-0.5
2,767,387	-		MPMX19_02652	0.67	+0.6
2,767,387	-		MPMX19_02652	0.67	-0.8
2,767,387	-		MPMX19_02652	0.67	+0.7
2,767,387	-		MPMX19_02652	0.67	+0.1
2,767,387	-		MPMX19_02652	0.67	-0.6
2,767,387	-		MPMX19_02652	0.67	-0.9
2,767,387	-		MPMX19_02652	0.67	-1.2
2,767,387	-		MPMX19_02652	0.67	+0.6
2,767,398	+		MPMX19_02652	0.68	+0.3
2,767,398	+		MPMX19_02652	0.68	-0.9
2,767,398	+		MPMX19_02652	0.68	-1.9
2,767,398	+		MPMX19_02652	0.68	-1.0
2,767,398	+		MPMX19_02652	0.68	+0.1
2,767,398	+		MPMX19_02652	0.68	-0.4
2,767,398	+		MPMX19_02652	0.68	-0.9
2,767,398	+		MPMX19_02652	0.68	-1.0
2,767,398	+		MPMX19_02652	0.68	-1.5
2,767,398	+		MPMX19_02652	0.68	-1.4
2,767,398	+		MPMX19_02652	0.68	-1.4
2,767,398	+		MPMX19_02652	0.68	+0.5
2,767,398	+		MPMX19_02652	0.68	-1.0
2,767,398	+		MPMX19_02652	0.68	-0.8
2,767,399	-		MPMX19_02652	0.68	-1.7
2,767,399	-		MPMX19_02652	0.68	+1.1
2,767,399	-		MPMX19_02652	0.68	-2.3
2,767,399	-		MPMX19_02652	0.68	-0.1
2,767,399	-		MPMX19_02652	0.68	+0.8
2,767,399	-		MPMX19_02652	0.68	-0.3
2,767,399	-		MPMX19_02652	0.68	+0.3
2,767,399	-		MPMX19_02652	0.68	+0.5
2,767,399	-		MPMX19_02652	0.68	+0.1
2,767,563	+		MPMX19_02652	0.87	-0.9
2,767,563	+		MPMX19_02652	0.87	-0.0
2,767,563	+		MPMX19_02652	0.87	+0.5
2,767,563	+		MPMX19_02652	0.87	+0.2
2,767,563	+		MPMX19_02652	0.87	-0.5
2,767,564	-		MPMX19_02652	0.87	-1.1
2,767,564	-		MPMX19_02652	0.87	-0.6
2,767,564	-		MPMX19_02652	0.87	-0.9
2,767,564	-		MPMX19_02652	0.87	+0.3
2,767,564	-		MPMX19_02652	0.87	+1.3
2,767,564	-		MPMX19_02652	0.87	-1.4
2,767,564	-		MPMX19_02652	0.87	+0.9
2,767,564	-		MPMX19_02652	0.87	+0.9
2,767,564	-		MPMX19_02652	0.87	+0.6
2,767,564	-		MPMX19_02652	0.87	-0.3
2,767,564	-		MPMX19_02652	0.87	+0.6
2,767,564	-		MPMX19_02652	0.87	+0.5