Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02592

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,709,744	-		MPMX19_02591	0.39	-0.1
2,709,744	-		MPMX19_02591	0.39	-2.3
2,709,895	+		MPMX19_02591	0.59	+0.7
2,709,895	+		MPMX19_02591	0.59	-0.7
2,709,895	+		MPMX19_02591	0.59	+1.7
2,709,895	+		MPMX19_02591	0.59	-1.9
2,709,895	+		MPMX19_02591	0.59	-1.7
2,709,895	+		MPMX19_02591	0.59	+2.4
2,709,895	+		MPMX19_02591	0.59	-0.2
2,709,895	+		MPMX19_02591	0.59	-1.9
2,709,895	+		MPMX19_02591	0.59	+0.2
2,709,895	+		MPMX19_02591	0.59	-0.2
2,709,895	+		MPMX19_02591	0.59	-0.8
2,709,895	+		MPMX19_02591	0.59	-0.7
2,709,895	+		MPMX19_02591	0.59	-0.1
2,709,895	+		MPMX19_02591	0.59	-0.5
2,709,895	+		MPMX19_02591	0.59	-0.6
2,709,895	+		MPMX19_02591	0.59	+0.7
2,709,895	+		MPMX19_02591	0.59	-1.1
2,709,895	+		MPMX19_02591	0.59	-0.1
2,709,895	+		MPMX19_02591	0.59	-0.7
2,709,895	+		MPMX19_02591	0.59	-0.5
2,709,895	+		MPMX19_02591	0.59	+0.0
2,709,895	+		MPMX19_02591	0.59	+1.1
2,709,895	+		MPMX19_02591	0.59	+0.0
2,709,895	+		MPMX19_02591	0.59	-0.2
2,709,895	+		MPMX19_02591	0.59	-1.1
2,709,895	+		MPMX19_02591	0.59	-0.8
2,709,895	+		MPMX19_02591	0.59	+0.2
2,709,895	+		MPMX19_02591	0.59	+0.3
2,709,896	-		MPMX19_02591	0.59	+0.7
2,709,896	-		MPMX19_02591	0.59	-0.4
2,709,896	-		MPMX19_02591	0.59	+1.1
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	-0.3
2,709,896	-		MPMX19_02591	0.59	-1.7
2,709,896	-		MPMX19_02591	0.59	-0.3
2,709,896	-		MPMX19_02591	0.59	-0.5
2,709,896	-		MPMX19_02591	0.59	-0.4
2,709,896	-		MPMX19_02591	0.59	-0.4
2,709,896	-		MPMX19_02591	0.59	-0.8
2,709,896	-		MPMX19_02591	0.59	-0.9
2,709,896	-		MPMX19_02591	0.59	-1.4
2,709,896	-		MPMX19_02591	0.59	+0.6
2,709,896	-		MPMX19_02591	0.59	+0.2
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	-0.3
2,709,896	-		MPMX19_02591	0.59	-0.3
2,709,896	-		MPMX19_02591	0.59	+1.0
2,709,896	-		MPMX19_02591	0.59	-1.1
2,709,896	-		MPMX19_02591	0.59	-0.4
2,709,896	-		MPMX19_02591	0.59	-1.1
2,709,896	-		MPMX19_02591	0.59	+0.1
2,709,896	-		MPMX19_02591	0.59	+1.3
2,709,896	-		MPMX19_02591	0.59	+0.8
2,709,896	-		MPMX19_02591	0.59	-0.1
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	-0.5
2,709,896	-		MPMX19_02591	0.59	-0.3
2,709,896	-		MPMX19_02591	0.59	-0.2
2,709,896	-		MPMX19_02591	0.59	+0.6
2,709,896	-		MPMX19_02591	0.59	-0.8
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	+0.2
2,709,896	-		MPMX19_02591	0.59	+0.8
2,709,896	-		MPMX19_02591	0.59	-0.0
2,709,896	-		MPMX19_02591	0.59	-0.9
2,709,896	-		MPMX19_02591	0.59	-1.8
2,709,896	-		MPMX19_02591	0.59	+1.0
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	-0.1
2,709,896	-		MPMX19_02591	0.59	-0.0
2,709,896	-		MPMX19_02591	0.59	-0.7
2,709,896	-		MPMX19_02591	0.59	+1.1
2,709,896	-		MPMX19_02591	0.59	-0.6
2,709,896	-		MPMX19_02591	0.59	-1.7
2,710,247	+				+0.1
2,710,247	+				+0.0
2,710,247	+				-1.9
2,710,247	+				-0.9
2,710,248	-				-0.6
2,710,248	-				-1.4
2,710,305	+				-0.9
2,710,305	+				+0.5
2,710,305	+				-2.3
2,710,305	+				-1.3
2,710,305	+				+0.0
2,710,305	+				+0.7
2,710,305	+				+1.9
2,710,306	-				-0.3
2,710,306	-				-0.4
2,710,306	-				-1.4
2,710,306	-				+1.1
2,710,306	-				-0.4
2,710,306	-				-0.0
2,710,306	-				-1.5
2,710,306	-				-0.7
2,710,475	+		MPMX19_02592	0.22	-0.9
2,710,475	+		MPMX19_02592	0.22	+0.5
2,710,476	-		MPMX19_02592	0.22	-1.0
2,710,476	-		MPMX19_02592	0.22	-0.6
2,710,476	-		MPMX19_02592	0.22	+0.9
2,710,476	-		MPMX19_02592	0.22	+1.3
2,710,476	-		MPMX19_02592	0.22	-0.1
2,710,476	-		MPMX19_02592	0.22	+1.9
2,710,476	-		MPMX19_02592	0.22	+1.3
2,710,476	-		MPMX19_02592	0.22	-1.3
2,710,724	+		MPMX19_02592	0.62	-2.4
2,710,724	+		MPMX19_02592	0.62	-0.1
2,710,724	+		MPMX19_02592	0.62	-1.9
2,710,725	-		MPMX19_02592	0.62	+0.3
2,710,725	-		MPMX19_02592	0.62	-1.1
2,710,725	-		MPMX19_02592	0.62	+0.4
2,710,725	-		MPMX19_02592	0.62	+0.3
2,710,725	-		MPMX19_02592	0.62	-0.9
2,710,725	-		MPMX19_02592	0.62	-0.2
2,710,748	+		MPMX19_02592	0.66	-0.5
2,710,748	+		MPMX19_02592	0.66	-0.6
2,710,748	+		MPMX19_02592	0.66	-1.9
2,710,748	+		MPMX19_02592	0.66	-0.8
2,710,748	+		MPMX19_02592	0.66	-0.2
2,710,748	+		MPMX19_02592	0.66	-0.5
2,710,749	-		MPMX19_02592	0.66	-0.2
2,710,749	-		MPMX19_02592	0.66	-0.3
2,710,769	+		MPMX19_02592	0.70	-0.7
2,710,769	+		MPMX19_02592	0.70	+0.5
2,710,769	+		MPMX19_02592	0.70	-1.2
2,710,769	+		MPMX19_02592	0.70	-0.9
2,710,769	+		MPMX19_02592	0.70	-0.9
2,710,769	+		MPMX19_02592	0.70	-0.7
2,710,769	+		MPMX19_02592	0.70	-0.8
2,710,769	+		MPMX19_02592	0.70	+1.1
2,710,769	+		MPMX19_02592	0.70	+1.2
2,710,769	+		MPMX19_02592	0.70	-0.3
2,710,769	+		MPMX19_02592	0.70	-0.3
2,710,769	+		MPMX19_02592	0.70	-0.1
2,710,769	+		MPMX19_02592	0.70	-0.2
2,710,769	+		MPMX19_02592	0.70	+0.1
2,710,769	+		MPMX19_02592	0.70	-0.4
2,710,769	+		MPMX19_02592	0.70	-0.3
2,710,769	+		MPMX19_02592	0.70	+0.0
2,710,769	+		MPMX19_02592	0.70	-1.4
2,710,769	+		MPMX19_02592	0.70	-1.0
2,710,769	+		MPMX19_02592	0.70	-0.5
2,710,769	+		MPMX19_02592	0.70	-0.2
2,710,769	+		MPMX19_02592	0.70	-0.1
2,710,769	+		MPMX19_02592	0.70	-2.3
2,710,769	+		MPMX19_02592	0.70	+0.2
2,710,769	+		MPMX19_02592	0.70	+0.9
2,710,769	+		MPMX19_02592	0.70	-0.5
2,710,769	+		MPMX19_02592	0.70	-0.4
2,710,769	+		MPMX19_02592	0.70	-1.4
2,710,769	+		MPMX19_02592	0.70	-1.3
2,710,769	+		MPMX19_02592	0.70	-0.2
2,710,769	+		MPMX19_02592	0.70	+0.4
2,710,769	+		MPMX19_02592	0.70	-0.1
2,710,769	+		MPMX19_02592	0.70	-1.3
2,710,769	+		MPMX19_02592	0.70	+0.9
2,710,769	+		MPMX19_02592	0.70	-0.7
2,710,770	-		MPMX19_02592	0.70	-0.0
2,710,770	-		MPMX19_02592	0.70	+0.2
2,710,770	-		MPMX19_02592	0.70	-1.9
2,710,770	-		MPMX19_02592	0.70	-0.8
2,710,770	-		MPMX19_02592	0.70	+0.1
2,710,770	-		MPMX19_02592	0.70	-0.9
2,710,770	-		MPMX19_02592	0.70	+0.6
2,710,770	-		MPMX19_02592	0.70	-1.4
2,710,770	-		MPMX19_02592	0.70	+0.5
2,710,770	-		MPMX19_02592	0.70	+0.8
2,710,770	-		MPMX19_02592	0.70	-1.4
2,710,770	-		MPMX19_02592	0.70	-0.9
2,710,770	-		MPMX19_02592	0.70	-0.5
2,710,770	-		MPMX19_02592	0.70	-0.2
2,710,770	-		MPMX19_02592	0.70	-0.9
2,710,770	-		MPMX19_02592	0.70	+0.3
2,710,770	-		MPMX19_02592	0.70	-1.1
2,710,770	-		MPMX19_02592	0.70	-0.5
2,710,770	-		MPMX19_02592	0.70	-1.0
2,710,785	-		MPMX19_02592	0.72	-0.2
2,710,785	-		MPMX19_02592	0.72	-1.6
2,710,785	-		MPMX19_02592	0.72	-1.3
2,710,936	+				-2.5
2,710,936	+				+0.5
2,710,936	+				+0.9
2,710,936	+				-0.3
2,710,936	+				+1.3
2,710,936	+				-0.9
2,710,937	-				-1.2
2,710,937	-				-0.6
2,710,937	-				+0.2
2,710,937	-				+0.1
2,711,108	+		MPMX19_02593	0.12	-0.8
2,711,108	+		MPMX19_02593	0.12	+0.2
2,711,108	+		MPMX19_02593	0.12	+0.5
2,711,108	+		MPMX19_02593	0.12	-0.7
2,711,108	+		MPMX19_02593	0.12	+0.3
2,711,109	-		MPMX19_02593	0.12	+0.2
2,711,109	-		MPMX19_02593	0.12	-1.7
2,711,109	-		MPMX19_02593	0.12	-0.9
2,711,109	-		MPMX19_02593	0.12	-0.2
2,711,109	-		MPMX19_02593	0.12	+0.2
2,711,109	-		MPMX19_02593	0.12	-0.4
2,711,109	-		MPMX19_02593	0.12	+1.3
2,711,109	-		MPMX19_02593	0.12	+0.3
2,711,109	-		MPMX19_02593	0.12	-0.1
2,711,771	+		MPMX19_02593	0.69	-1.4
2,711,777	+		MPMX19_02593	0.70	-0.8
2,711,777	+		MPMX19_02593	0.70	-1.0
2,711,777	+		MPMX19_02593	0.70	-0.3
2,711,777	+		MPMX19_02593	0.70	-0.5
2,711,777	+		MPMX19_02593	0.70	-0.6
2,711,777	+		MPMX19_02593	0.70	-0.9
2,711,777	+		MPMX19_02593	0.70	+0.2
2,711,778	-		MPMX19_02593	0.70	+2.9
2,711,778	-		MPMX19_02593	0.70	-1.9
2,711,778	-		MPMX19_02593	0.70	-2.7
2,711,778	-		MPMX19_02593	0.70	-1.1
2,711,778	-		MPMX19_02593	0.70	+1.6
2,711,778	-		MPMX19_02593	0.70	-0.4
2,711,778	-		MPMX19_02593	0.70	+1.3
2,711,778	-		MPMX19_02593	0.70	+0.6
2,711,778	-		MPMX19_02593	0.70	+0.6