Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01485

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,558,973	+		MPMX19_01483	0.89	+0.7
1,558,973	+		MPMX19_01483	0.89	+0.7
1,558,973	+		MPMX19_01483	0.89	+0.6
1,558,973	+		MPMX19_01483	0.89	-0.2
1,558,973	+		MPMX19_01483	0.89	+0.0
1,558,973	+		MPMX19_01483	0.89	+0.1
1,558,973	+		MPMX19_01483	0.89	+1.3
1,558,973	+		MPMX19_01483	0.89	+0.2
1,558,973	+		MPMX19_01483	0.89	+0.0
1,558,973	+		MPMX19_01483	0.89	+0.5
1,558,973	+		MPMX19_01483	0.89	+0.1
1,558,973	+		MPMX19_01483	0.89	+0.8
1,558,973	+		MPMX19_01483	0.89	+0.3
1,558,973	+		MPMX19_01483	0.89	+0.4
1,558,973	+		MPMX19_01483	0.89	+0.6
1,558,973	+		MPMX19_01483	0.89	+2.4
1,558,973	+		MPMX19_01483	0.89	-0.1
1,558,973	+		MPMX19_01483	0.89	+1.1
1,558,973	+		MPMX19_01483	0.89	+1.1
1,558,973	+		MPMX19_01483	0.89	+0.9
1,558,973	+		MPMX19_01483	0.89	+1.3
1,558,973	+		MPMX19_01483	0.89	+0.7
1,558,973	+		MPMX19_01483	0.89	+1.9
1,558,973	+		MPMX19_01483	0.89	+0.7
1,558,974	-		MPMX19_01483	0.89	+0.8
1,558,974	-		MPMX19_01483	0.89	+0.9
1,558,974	-		MPMX19_01483	0.89	+0.9
1,558,974	-		MPMX19_01483	0.89	-0.2
1,558,974	-		MPMX19_01483	0.89	-0.5
1,558,974	-		MPMX19_01483	0.89	+0.3
1,558,974	-		MPMX19_01483	0.89	+1.2
1,558,974	-		MPMX19_01483	0.89	+0.4
1,558,974	-		MPMX19_01483	0.89	+0.8
1,558,974	-		MPMX19_01483	0.89	+0.9
1,558,974	-		MPMX19_01483	0.89	+1.0
1,558,974	-		MPMX19_01483	0.89	+0.4
1,558,974	-		MPMX19_01483	0.89	+0.3
1,558,974	-		MPMX19_01483	0.89	-0.0
1,558,974	-		MPMX19_01483	0.89	+0.0
1,558,974	-		MPMX19_01483	0.89	+0.8
1,558,974	-		MPMX19_01483	0.89	-1.1
1,558,974	-		MPMX19_01483	0.89	+0.7
1,558,974	-		MPMX19_01483	0.89	+0.4
1,558,974	-		MPMX19_01483	0.89	-0.1
1,558,974	-		MPMX19_01483	0.89	+0.9
1,558,974	-		MPMX19_01483	0.89	-1.5
1,558,974	-		MPMX19_01483	0.89	+1.5
1,558,974	-		MPMX19_01483	0.89	+0.3
1,559,181	+		MPMX19_01484	0.12	-0.3
1,559,181	+		MPMX19_01484	0.12	+0.7
1,559,181	+		MPMX19_01484	0.12	+1.2
1,559,182	-		MPMX19_01484	0.12	+0.8
1,559,217	+		MPMX19_01484	0.17	+1.3
1,559,217	+		MPMX19_01484	0.17	+1.3
1,559,218	-		MPMX19_01484	0.17	+0.0
1,559,218	-		MPMX19_01484	0.17	+1.7
1,559,218	-		MPMX19_01484	0.17	+1.4
1,559,218	-		MPMX19_01484	0.17	+0.8
1,559,218	-		MPMX19_01484	0.17	-0.8
1,559,218	-		MPMX19_01484	0.17	+1.4
1,559,218	-		MPMX19_01484	0.17	+1.9
1,559,218	-		MPMX19_01484	0.17	+1.0
1,559,218	-		MPMX19_01484	0.17	+0.6
1,559,348	+		MPMX19_01484	0.33	+0.4
1,559,348	+		MPMX19_01484	0.33	+0.4
1,559,348	+		MPMX19_01484	0.33	+1.1
1,559,349	-		MPMX19_01484	0.34	+1.5
1,559,388	+		MPMX19_01484	0.39	+0.8
1,559,388	+		MPMX19_01484	0.39	-1.0
1,559,388	+		MPMX19_01484	0.39	+1.6
1,559,389	-		MPMX19_01484	0.39	-0.6
1,559,389	-		MPMX19_01484	0.39	+1.3
1,559,389	-		MPMX19_01484	0.39	+1.3
1,559,424	+		MPMX19_01484	0.43	+1.4
1,559,424	+		MPMX19_01484	0.43	+1.6
1,559,424	+		MPMX19_01484	0.43	+0.2
1,559,424	+		MPMX19_01484	0.43	+0.1
1,559,424	+		MPMX19_01484	0.43	+1.4
1,559,424	+		MPMX19_01484	0.43	+1.4
1,559,425	-		MPMX19_01484	0.43	+1.7
1,559,425	-		MPMX19_01484	0.43	+0.7
1,559,425	-		MPMX19_01484	0.43	+0.5
1,559,425	-		MPMX19_01484	0.43	+1.2
1,559,425	-		MPMX19_01484	0.43	+0.7
1,559,425	-		MPMX19_01484	0.43	+1.3
1,559,425	-		MPMX19_01484	0.43	+1.7
1,559,802	+				+0.0
1,559,803	-				+0.4
1,559,868	+				-0.1
1,559,868	+				-0.0
1,559,868	+				-1.9
1,559,868	+				+0.1
1,559,868	+				-0.1
1,559,868	+				+0.3
1,559,868	+				-0.7
1,559,869	-				+0.6
1,559,869	-				-0.3
1,559,869	-				-1.1
1,559,869	-				+0.3
1,559,869	-				-0.1
1,560,081	+		MPMX19_01485	0.20	+1.2
1,560,081	+		MPMX19_01485	0.20	-0.5
1,560,081	+		MPMX19_01485	0.20	-0.1
1,560,081	+		MPMX19_01485	0.20	+0.8
1,560,081	+		MPMX19_01485	0.20	+0.3
1,560,081	+		MPMX19_01485	0.20	+1.1
1,560,081	+		MPMX19_01485	0.20	+1.6
1,560,081	+		MPMX19_01485	0.20	-0.1
1,560,081	+		MPMX19_01485	0.20	+1.0
1,560,082	-		MPMX19_01485	0.20	+1.1
1,560,082	-		MPMX19_01485	0.20	+0.7
1,560,082	-		MPMX19_01485	0.20	+0.1
1,560,082	-		MPMX19_01485	0.20	+0.9
1,560,225	+		MPMX19_01485	0.38	+0.4
1,560,225	+		MPMX19_01485	0.38	+1.2
1,560,225	+		MPMX19_01485	0.38	+1.0
1,560,225	+		MPMX19_01485	0.38	+0.7
1,560,225	+		MPMX19_01485	0.38	+1.1
1,560,225	+		MPMX19_01485	0.38	+1.1
1,560,225	+		MPMX19_01485	0.38	+1.0
1,560,225	+		MPMX19_01485	0.38	+1.2
1,560,226	-		MPMX19_01485	0.38	+1.6
1,560,226	-		MPMX19_01485	0.38	-0.2
1,560,226	-		MPMX19_01485	0.38	+1.0
1,560,226	-		MPMX19_01485	0.38	+0.6
1,560,226	-		MPMX19_01485	0.38	+1.5
1,560,226	-		MPMX19_01485	0.38	+0.3
1,560,226	-		MPMX19_01485	0.38	+0.0
1,560,228	+		MPMX19_01485	0.38	+0.7
1,560,228	+		MPMX19_01485	0.38	-0.5
1,560,228	+		MPMX19_01485	0.38	+1.2
1,560,228	+		MPMX19_01485	0.38	+0.7
1,560,228	+		MPMX19_01485	0.38	+0.9
1,560,228	+		MPMX19_01485	0.38	+0.3
1,560,228	+		MPMX19_01485	0.38	+2.0
1,560,228	+		MPMX19_01485	0.38	+1.3
1,560,228	+		MPMX19_01485	0.38	+0.2
1,560,228	+		MPMX19_01485	0.38	-0.9
1,560,228	+		MPMX19_01485	0.38	+1.3
1,560,228	+		MPMX19_01485	0.38	-1.3
1,560,228	+		MPMX19_01485	0.38	+1.3
1,560,228	+		MPMX19_01485	0.38	+0.7
1,560,228	+		MPMX19_01485	0.38	+0.6
1,560,228	+		MPMX19_01485	0.38	+2.2
1,560,228	+		MPMX19_01485	0.38	+1.3
1,560,228	+		MPMX19_01485	0.38	+0.4
1,560,228	+		MPMX19_01485	0.38	+1.2
1,560,228	+		MPMX19_01485	0.38	+0.2
1,560,228	+		MPMX19_01485	0.38	+0.9
1,560,228	+		MPMX19_01485	0.38	+0.9
1,560,228	+		MPMX19_01485	0.38	+0.3
1,560,228	+		MPMX19_01485	0.38	+0.8
1,560,228	+		MPMX19_01485	0.38	+0.4
1,560,228	+		MPMX19_01485	0.38	+0.8
1,560,229	-		MPMX19_01485	0.38	-0.2
1,560,229	-		MPMX19_01485	0.38	+0.2
1,560,229	-		MPMX19_01485	0.38	+0.6
1,560,229	-		MPMX19_01485	0.38	+1.1
1,560,229	-		MPMX19_01485	0.38	+0.1
1,560,229	-		MPMX19_01485	0.38	+1.3
1,560,229	-		MPMX19_01485	0.38	-0.2
1,560,229	-		MPMX19_01485	0.38	+0.6
1,560,229	-		MPMX19_01485	0.38	+1.1
1,560,229	-		MPMX19_01485	0.38	+0.9
1,560,229	-		MPMX19_01485	0.38	+0.1
1,560,229	-		MPMX19_01485	0.38	+1.0
1,560,229	-		MPMX19_01485	0.38	+1.4
1,560,229	-		MPMX19_01485	0.38	+0.6
1,560,229	-		MPMX19_01485	0.38	+0.7
1,560,229	-		MPMX19_01485	0.38	+0.6
1,560,714	+				+0.2
1,560,714	+				+0.2
1,561,312	+		MPMX19_01486	0.76	-0.4
1,561,312	+		MPMX19_01486	0.76	-0.2
1,561,312	+		MPMX19_01486	0.76	+1.3
1,561,312	+		MPMX19_01486	0.76	+0.5
1,561,312	+		MPMX19_01486	0.76	+0.7
1,561,313	-		MPMX19_01486	0.76	+0.5
1,561,313	-		MPMX19_01486	0.76	+0.6
1,561,313	-		MPMX19_01486	0.76	-0.2
1,561,313	-		MPMX19_01486	0.76	+1.2
1,561,313	-		MPMX19_01486	0.76	+0.1
1,561,313	-		MPMX19_01486	0.76	+0.6
1,561,313	-		MPMX19_01486	0.76	+0.1
1,561,313	-		MPMX19_01486	0.76	+1.5
1,561,313	-		MPMX19_01486	0.76	+2.0
1,561,313	-		MPMX19_01486	0.76	+0.8
1,561,313	-		MPMX19_01486	0.76	+0.8
1,561,384	+		MPMX19_01486	0.85	-0.1
1,561,384	+		MPMX19_01486	0.85	+0.6
1,561,384	+		MPMX19_01486	0.85	+0.8
1,561,384	+		MPMX19_01486	0.85	+1.0
1,561,384	+		MPMX19_01486	0.85	+0.9
1,561,385	-		MPMX19_01486	0.86	+0.5
1,561,385	-		MPMX19_01486	0.86	-0.1
1,561,385	-		MPMX19_01486	0.86	+0.5
1,561,385	-		MPMX19_01486	0.86	+1.1
1,561,414	+		MPMX19_01486	0.89	+0.9
1,561,414	+		MPMX19_01486	0.89	+0.5
1,561,414	+		MPMX19_01486	0.89	+0.6
1,561,415	-		MPMX19_01486	0.90	+1.0
1,561,415	-		MPMX19_01486	0.90	-0.6
1,561,415	-		MPMX19_01486	0.90	+0.2
1,561,415	-		MPMX19_01486	0.90	+0.8
1,561,415	-		MPMX19_01486	0.90	+0.1
1,561,415	-		MPMX19_01486	0.90	+0.6
1,561,471	+				-0.3
1,561,471	+				-0.5
1,561,471	+				+1.2
1,561,471	+				+1.4
1,561,471	+				+0.7
1,561,471	+				+0.8
1,561,471	+				+1.3
1,561,471	+				+1.9
1,561,472	-				+2.2
1,561,472	-				+0.6
1,561,472	-				-0.8
1,561,472	-				+0.9
1,561,472	-				+0.5
1,561,472	-				+2.1
1,561,472	-				+0.5
1,561,472	-				+1.1
1,561,472	-				+0.9
1,561,492	+				-2.2
1,561,492	+				-0.9
1,561,492	+				-0.3
1,561,492	+				-1.2
1,561,492	+				-1.1
1,561,492	+				-0.8
1,561,492	+				-0.6
1,561,492	+				-0.7
1,561,492	+				-0.5
1,561,492	+				-0.5
1,561,492	+				-0.7
1,561,493	-				+0.6
1,561,493	-				-0.9
1,561,493	-				+1.1
1,561,493	-				-0.5
1,561,493	-				+0.9
1,561,493	-				-2.0
1,561,493	-				+0.6
1,561,493	-				-0.2
1,561,493	-				+0.5
1,561,493	-				-0.5
1,561,493	-				-0.2
1,561,493	-				-1.8
1,561,508	-				-0.9
1,561,599	+				-0.1