Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01146

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,181,830	+				+0.9
1,181,830	+				-0.6
1,181,830	+				-0.0
1,181,831	-				+0.8
1,181,831	-				+0.7
1,181,992	+		MPMX19_01146	0.17	-0.3
1,181,992	+		MPMX19_01146	0.17	-0.2
1,181,992	+		MPMX19_01146	0.17	-0.6
1,181,992	+		MPMX19_01146	0.17	+0.2
1,181,992	+		MPMX19_01146	0.17	+0.5
1,181,992	+		MPMX19_01146	0.17	-1.1
1,181,992	+		MPMX19_01146	0.17	+0.3
1,181,992	+		MPMX19_01146	0.17	-1.1
1,181,992	+		MPMX19_01146	0.17	+0.2
1,181,992	+		MPMX19_01146	0.17	+1.7
1,181,992	+		MPMX19_01146	0.17	-0.2
1,181,992	+		MPMX19_01146	0.17	+1.1
1,181,992	+		MPMX19_01146	0.17	-2.1
1,181,992	+		MPMX19_01146	0.17	+0.5
1,181,993	-		MPMX19_01146	0.17	+0.9
1,181,993	-		MPMX19_01146	0.17	-0.7
1,181,993	-		MPMX19_01146	0.17	+0.1
1,181,993	-		MPMX19_01146	0.17	-0.8
1,181,993	-		MPMX19_01146	0.17	+0.9
1,181,993	-		MPMX19_01146	0.17	-0.3
1,181,993	-		MPMX19_01146	0.17	-0.2
1,181,993	-		MPMX19_01146	0.17	-0.8
1,182,121	+		MPMX19_01146	0.28	-0.2
1,182,121	+		MPMX19_01146	0.28	-0.9
1,182,121	+		MPMX19_01146	0.28	-1.2
1,182,121	+		MPMX19_01146	0.28	-0.1
1,182,122	-		MPMX19_01146	0.28	-0.0
1,182,122	-		MPMX19_01146	0.28	-1.0
1,182,122	-		MPMX19_01146	0.28	+1.1
1,182,122	-		MPMX19_01146	0.28	-0.2
1,182,122	-		MPMX19_01146	0.28	-1.6
1,182,122	-		MPMX19_01146	0.28	+0.3
1,182,122	-		MPMX19_01146	0.28	-1.8
1,182,122	-		MPMX19_01146	0.28	-0.8
1,182,122	-		MPMX19_01146	0.28	+0.1
1,182,122	-		MPMX19_01146	0.28	+0.1
1,182,253	+		MPMX19_01146	0.38	-2.5
1,182,253	+		MPMX19_01146	0.38	-0.2
1,182,253	+		MPMX19_01146	0.38	+0.4
1,182,253	+		MPMX19_01146	0.38	-0.1
1,182,253	+		MPMX19_01146	0.38	+0.7
1,182,253	+		MPMX19_01146	0.38	-0.4
1,182,254	-		MPMX19_01146	0.39	-1.1
1,182,254	-		MPMX19_01146	0.39	-0.3
1,182,254	-		MPMX19_01146	0.39	-0.8
1,182,254	-		MPMX19_01146	0.39	+0.3
1,182,254	-		MPMX19_01146	0.39	+0.3
1,182,254	-		MPMX19_01146	0.39	-0.3
1,182,254	-		MPMX19_01146	0.39	+0.3
1,182,254	-		MPMX19_01146	0.39	+0.7
1,182,325	+		MPMX19_01146	0.44	-0.7
1,182,325	+		MPMX19_01146	0.44	-0.7
1,182,325	+		MPMX19_01146	0.44	+0.1
1,182,326	-		MPMX19_01146	0.44	+0.7
1,182,326	-		MPMX19_01146	0.44	-0.5
1,182,326	-		MPMX19_01146	0.44	-1.1
1,182,326	-		MPMX19_01146	0.44	+0.0
1,182,326	-		MPMX19_01146	0.44	-0.8
1,182,613	+		MPMX19_01146	0.68	-0.6
1,182,613	+		MPMX19_01146	0.68	-0.4
1,182,613	+		MPMX19_01146	0.68	+0.2
1,182,613	+		MPMX19_01146	0.68	-0.2
1,182,613	+		MPMX19_01146	0.68	-1.7
1,182,613	+		MPMX19_01146	0.68	-1.3
1,182,613	+		MPMX19_01146	0.68	-1.1
1,182,613	+		MPMX19_01146	0.68	+0.1
1,182,613	+		MPMX19_01146	0.68	+0.7
1,182,613	+		MPMX19_01146	0.68	-0.8
1,182,613	+		MPMX19_01146	0.68	+0.2
1,182,613	+		MPMX19_01146	0.68	+0.3
1,182,613	+		MPMX19_01146	0.68	+0.9
1,182,613	+		MPMX19_01146	0.68	+0.1
1,182,613	+		MPMX19_01146	0.68	+0.4
1,182,613	+		MPMX19_01146	0.68	-0.5
1,182,614	-		MPMX19_01146	0.68	-0.1
1,182,614	-		MPMX19_01146	0.68	+0.5
1,182,614	-		MPMX19_01146	0.68	+0.9
1,182,614	-		MPMX19_01146	0.68	+0.0
1,182,614	-		MPMX19_01146	0.68	-1.2
1,182,614	-		MPMX19_01146	0.68	+0.9
1,182,614	-		MPMX19_01146	0.68	+0.9
1,182,614	-		MPMX19_01146	0.68	-0.4
1,182,614	-		MPMX19_01146	0.68	-0.5
1,182,614	-		MPMX19_01146	0.68	-1.6
1,182,614	-		MPMX19_01146	0.68	+0.5
1,182,614	-		MPMX19_01146	0.68	-1.5
1,182,614	-		MPMX19_01146	0.68	-0.6
1,182,614	-		MPMX19_01146	0.68	+0.2
1,182,614	-		MPMX19_01146	0.68	-0.4
1,182,614	-		MPMX19_01146	0.68	+0.1
1,182,877	+				-0.7
1,182,877	+				-0.3
1,182,878	-				-0.5
1,182,904	+				-0.2
1,182,904	+				+0.2
1,182,904	+				+0.7
1,182,904	+				-1.0
1,182,904	+				+0.0
1,182,904	+				-0.1
1,182,904	+				-0.5
1,182,904	+				-1.2
1,182,904	+				+0.9
1,182,904	+				+0.0
1,182,904	+				+0.3
1,182,905	-				+0.1
1,182,905	-				-1.4
1,182,905	-				+0.9
1,182,905	-				-0.5
1,182,905	-				-0.4
1,182,905	-				+0.4
1,182,905	-				-0.9
1,182,905	-				-0.7
1,182,905	-				+1.7
1,182,905	-				-0.7
1,182,905	-				+0.3
1,182,905	-				+1.0
1,182,986	+				+0.1
1,182,986	+				+0.3
1,182,986	+				-0.7
1,183,100	+				-1.5
1,183,100	+				-0.8
1,183,100	+				-0.8
1,183,101	-				-0.6
1,183,101	-				+0.4
1,183,101	-				-1.3
1,183,177	+				+0.2
1,183,177	+				+1.7
1,183,177	+				-1.1
1,183,177	+				-1.8
1,183,178	-				-0.5
1,183,178	-				-0.1
1,183,178	-				-0.5
1,183,178	-				+0.6
1,183,178	-				-0.3
1,183,178	-				-1.3
1,183,178	-				-0.5
1,183,178	-				-1.1
1,183,250	+				+0.5
1,183,250	+				-1.3
1,183,250	+				-0.2
1,183,250	+				-1.3
1,183,250	+				-0.1
1,183,250	+				+0.7
1,183,250	+				-0.6
1,183,250	+				-0.5
1,183,250	+				-0.7
1,183,250	+				+0.3
1,183,250	+				-1.3
1,183,250	+				-0.2
1,183,251	-				+0.6
1,183,251	-				-2.0
1,183,251	-				-0.0
1,183,251	-				+1.7
1,183,251	-				-0.6
1,183,251	-				-0.9
1,183,251	-				-0.3
1,183,251	-				+1.4
1,183,251	-				-0.0
1,183,251	-				+0.3
1,183,251	-				+0.0
1,183,251	-				+1.0
1,183,285	+				+0.4
1,183,330	+				-1.2
1,183,331	-				+0.2
1,183,331	-				-1.5
1,183,771	-		MPMX19_01147	0.44	-0.9
1,183,771	-		MPMX19_01147	0.44	-1.5
1,183,873	-		MPMX19_01147	0.58	+1.2
1,183,873	-		MPMX19_01147	0.58	-0.2
1,183,901	-		MPMX19_01147	0.61	+0.1
1,183,954	+		MPMX19_01147	0.68	+0.1
1,183,954	+		MPMX19_01147	0.68	-1.8
1,183,954	+		MPMX19_01147	0.68	+0.7
1,183,954	+		MPMX19_01147	0.68	+0.1
1,183,954	+		MPMX19_01147	0.68	-1.0
1,183,955	-		MPMX19_01147	0.68	+0.6
1,183,955	-		MPMX19_01147	0.68	-0.9