Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00998

Experiment: NL-CCM; high oxygen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00997 and MPMX19_00998 are separated by 1 nucleotidesMPMX19_00998 and MPMX19_00999 are separated by 229 nucleotidesMPMX19_00999 and MPMX19_01000 overlap by 4 nucleotides MPMX19_00997: MPMX19_00997 - Outer membrane protein assembly factor BamA, at 1,037,752 to 1,040,091 _00997 MPMX19_00998: MPMX19_00998 - hypothetical protein, at 1,040,093 to 1,040,737 _00998 MPMX19_00999: MPMX19_00999 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 1,040,967 to 1,041,449 _00999 MPMX19_01000: MPMX19_01000 - Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 1,041,446 to 1,042,240 _01000 Position (kb) 1040 1041Strain fitness (log2 ratio) -1 0 1at 1040.089 kb on + strandat 1040.089 kb on + strandat 1040.089 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; high oxygen
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1,040,089 + -0.5
1,040,089 + +0.1
1,040,089 + -0.6

Or see this region's nucleotide sequence