Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00129 and MPMX19_00130 are separated by 439 nucleotides
MPMX19_00129: MPMX19_00129 - hypothetical protein, at 140,366 to 140,632
_00129
MPMX19_00130: MPMX19_00130 - hypothetical protein, at 141,072 to 142,259
_00130
Position (kb) 140
141 Strain fitness (log2 ratio) -2
-1
0
1
2 at 139.650 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.879 kb on + strand at 140.177 kb on + strand at 140.177 kb on + strand at 140.177 kb on + strand at 140.419 kb on + strand, within MPMX19_00129 at 140.470 kb on + strand, within MPMX19_00129 at 140.470 kb on + strand, within MPMX19_00129 at 140.938 kb on + strand at 140.939 kb on - strand at 140.939 kb on - strand at 141.009 kb on - strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.266 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 139,650 - +0.7 139,675 - -1.9 139,675 - -2.3 139,675 - +0.2 139,879 + -0.9 140,177 + -1.8 140,177 + -0.9 140,177 + -1.4 140,419 + MPMX19_00129 0.20 -1.4 140,470 + MPMX19_00129 0.39 -0.5 140,470 + MPMX19_00129 0.39 +0.6 140,938 + +0.2 140,939 - -1.0 140,939 - +2.2 141,009 - -1.0 141,102 + +0.6 141,102 + +1.2 141,102 + -1.8 141,102 + -1.6 141,102 + -0.8 141,102 + -2.3 141,102 + +1.3 141,102 + -0.4 141,102 + -0.5 141,102 + -1.7 141,102 + +0.1 141,102 + +1.1 141,102 + -2.3 141,102 + +0.7 141,102 + -1.3 141,103 - -0.2 141,103 - -1.0 141,103 - +0.2 141,103 - -0.7 141,103 - -1.4 141,103 - -1.0 141,103 - -1.4 141,103 - -0.2 141,103 - -1.4 141,266 + MPMX19_00130 0.16 -0.9 141,441 + MPMX19_00130 0.31 -1.5 141,441 + MPMX19_00130 0.31 -2.3 141,441 + MPMX19_00130 0.31 -1.6 141,441 + MPMX19_00130 0.31 -0.0 141,441 + MPMX19_00130 0.31 -0.2 141,441 + MPMX19_00130 0.31 -0.8 141,442 - MPMX19_00130 0.31 -0.4 141,442 - MPMX19_00130 0.31 -0.8 141,442 - MPMX19_00130 0.31 -1.4 141,442 - MPMX19_00130 0.31 +0.0 141,442 - MPMX19_00130 0.31 +0.1 141,442 - MPMX19_00130 0.31 +0.1 141,442 - MPMX19_00130 0.31 -1.0 141,442 - MPMX19_00130 0.31 -0.2 141,486 + MPMX19_00130 0.35 +0.5 141,486 + MPMX19_00130 0.35 +1.9 141,486 + MPMX19_00130 0.35 -0.9 141,486 + MPMX19_00130 0.35 +1.0 141,486 + MPMX19_00130 0.35 -0.5 141,486 + MPMX19_00130 0.35 +0.8 141,486 + MPMX19_00130 0.35 -1.1 141,486 + MPMX19_00130 0.35 -1.0 141,486 + MPMX19_00130 0.35 -0.5 141,486 + MPMX19_00130 0.35 -1.0 141,487 - MPMX19_00130 0.35 +0.6 141,487 - MPMX19_00130 0.35 -1.9 141,487 - MPMX19_00130 0.35 +0.5 141,487 - MPMX19_00130 0.35 +2.1 141,487 - MPMX19_00130 0.35 -0.3 141,487 - MPMX19_00130 0.35 -0.4 141,487 - MPMX19_00130 0.35 -0.3 141,487 - MPMX19_00130 0.35 +0.6 141,487 - MPMX19_00130 0.35 -0.5 141,487 - MPMX19_00130 0.35 -0.4 141,487 - MPMX19_00130 0.35 -1.1 141,487 - MPMX19_00130 0.35 -1.2 141,487 - MPMX19_00130 0.35 -0.5 141,487 - MPMX19_00130 0.35 -0.6 141,487 - MPMX19_00130 0.35 -2.2
Or see this region's nucleotide sequence