Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF763 and GFF764 are separated by 170 nucleotides GFF764 and GFF765 are separated by 15 nucleotides
GFF763 - Leu/Ile/Val-binding protein, at 814,404 to 815,636
GFF763
GFF764 - Dimethyl-sulfide monooxygenase, at 815,807 to 817,180
GFF764
GFF765 - Thiosulfate sulfurtransferase GlpE, at 817,196 to 818,818
GFF765
Position (kb) 815
816
817
818 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 814.861 kb on + strand, within GFF763 at 814.862 kb on - strand, within GFF763 at 814.924 kb on + strand, within GFF763 at 814.985 kb on - strand, within GFF763 at 815.432 kb on + strand, within GFF763 at 815.909 kb on + strand at 815.910 kb on - strand at 815.924 kb on + strand at 815.925 kb on - strand at 815.925 kb on - strand at 816.000 kb on - strand, within GFF764 at 816.137 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.184 kb on + strand, within GFF764 at 816.285 kb on - strand, within GFF764 at 816.318 kb on - strand, within GFF764 at 816.425 kb on + strand, within GFF764 at 816.485 kb on + strand, within GFF764 at 816.708 kb on - strand, within GFF764 at 817.085 kb on + strand at 817.085 kb on + strand at 817.085 kb on + strand at 817.086 kb on - strand at 817.086 kb on - strand at 817.086 kb on - strand at 817.266 kb on + strand at 817.266 kb on + strand at 817.266 kb on + strand at 817.267 kb on - strand at 817.267 kb on - strand at 817.267 kb on - strand at 817.305 kb on + strand at 817.306 kb on - strand at 817.494 kb on + strand, within GFF765 at 817.494 kb on + strand, within GFF765 at 817.495 kb on - strand, within GFF765 at 817.495 kb on - strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.520 kb on + strand, within GFF765 at 817.521 kb on - strand, within GFF765 at 817.521 kb on - strand, within GFF765 at 817.581 kb on + strand, within GFF765 at 817.582 kb on - strand, within GFF765 at 817.582 kb on - strand, within GFF765 at 817.898 kb on + strand, within GFF765 at 817.898 kb on + strand, within GFF765 at 817.899 kb on - strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.956 kb on + strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765 at 817.957 kb on - strand, within GFF765
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 814,861 + GFF763 0.37 +0.3 814,862 - GFF763 0.37 -0.8 814,924 + GFF763 0.42 +0.9 814,985 - GFF763 0.47 -0.8 815,432 + GFF763 0.83 +0.9 815,909 + +0.4 815,910 - -0.3 815,924 + -0.8 815,925 - +0.5 815,925 - +0.1 816,000 - GFF764 0.14 +0.3 816,137 + GFF764 0.24 -0.0 816,184 + GFF764 0.27 -0.5 816,184 + GFF764 0.27 -0.5 816,184 + GFF764 0.27 -1.8 816,184 + GFF764 0.27 -2.6 816,184 + GFF764 0.27 +0.1 816,184 + GFF764 0.27 +0.1 816,285 - GFF764 0.35 +0.5 816,318 - GFF764 0.37 +0.7 816,425 + GFF764 0.45 -1.0 816,485 + GFF764 0.49 +0.1 816,708 - GFF764 0.66 +1.1 817,085 + +0.8 817,085 + -0.8 817,085 + +0.3 817,086 - +0.4 817,086 - +1.4 817,086 - -0.7 817,266 + +3.2 817,266 + -1.0 817,266 + -0.2 817,267 - +0.4 817,267 - -1.4 817,267 - +0.6 817,305 + +0.3 817,306 - -0.7 817,494 + GFF765 0.18 -0.7 817,494 + GFF765 0.18 +0.2 817,495 - GFF765 0.18 -0.1 817,495 - GFF765 0.18 +0.8 817,520 + GFF765 0.20 -0.2 817,520 + GFF765 0.20 -1.5 817,520 + GFF765 0.20 -2.5 817,521 - GFF765 0.20 -0.3 817,521 - GFF765 0.20 -0.4 817,581 + GFF765 0.24 -0.4 817,582 - GFF765 0.24 +0.2 817,582 - GFF765 0.24 -0.2 817,898 + GFF765 0.43 +0.5 817,898 + GFF765 0.43 +0.3 817,899 - GFF765 0.43 +0.8 817,956 + GFF765 0.47 +0.0 817,956 + GFF765 0.47 -0.5 817,956 + GFF765 0.47 +0.0 817,956 + GFF765 0.47 +1.2 817,957 - GFF765 0.47 -0.1 817,957 - GFF765 0.47 +0.6 817,957 - GFF765 0.47 +0.2 817,957 - GFF765 0.47 -0.0 817,957 - GFF765 0.47 +1.6
Or see this region's nucleotide sequence