Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF727 and GFF728 are separated by 1 nucleotides GFF728 and GFF729 overlap by 19 nucleotides GFF729 and GFF730 are separated by 67 nucleotides GFF730 and GFF731 are separated by 239 nucleotides
GFF727 - Lipoyl synthase, at 774,140 to 775,093
GFF727
GFF728 - Ribosome association toxin RatA, at 775,095 to 775,553
GFF728
GFF729 - hypothetical protein, at 775,535 to 775,948
GFF729
GFF730 - Leu/Ile/Val-binding protein, at 776,016 to 777,116
GFF730
GFF731 - Leu/Ile/Val-binding protein, at 777,356 to 778,456
GFF731
Position (kb) 776
777
778 Strain fitness (log2 ratio) -2
-1
0
1
2 at 775.536 kb on + strand at 775.537 kb on - strand at 775.729 kb on - strand, within GFF729 at 776.017 kb on + strand at 776.018 kb on - strand at 776.050 kb on + strand at 776.051 kb on - strand at 776.051 kb on - strand at 776.051 kb on - strand at 776.218 kb on + strand, within GFF730 at 776.227 kb on + strand, within GFF730 at 776.227 kb on + strand, within GFF730 at 776.458 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.733 kb on - strand, within GFF730 at 777.334 kb on - strand at 777.370 kb on - strand at 777.370 kb on - strand at 777.390 kb on + strand at 777.390 kb on + strand at 777.390 kb on + strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.552 kb on + strand, within GFF731 at 777.552 kb on + strand, within GFF731 at 777.558 kb on + strand, within GFF731 at 777.558 kb on + strand, within GFF731 at 777.784 kb on - strand, within GFF731 at 777.846 kb on + strand, within GFF731 at 777.846 kb on + strand, within GFF731 at 777.877 kb on - strand, within GFF731 at 777.881 kb on - strand, within GFF731 at 777.942 kb on + strand, within GFF731 at 778.000 kb on - strand, within GFF731 at 778.000 kb on - strand, within GFF731
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 775,536 + -0.9 775,537 - +0.1 775,729 - GFF729 0.47 -0.8 776,017 + +1.3 776,018 - +0.9 776,050 + -0.1 776,051 - +0.7 776,051 - +0.6 776,051 - +0.8 776,218 + GFF730 0.18 +0.1 776,227 + GFF730 0.19 -1.1 776,227 + GFF730 0.19 +0.7 776,458 + GFF730 0.40 -0.1 776,536 + GFF730 0.47 +0.2 776,536 + GFF730 0.47 -1.8 776,536 + GFF730 0.47 +0.3 776,536 + GFF730 0.47 -0.1 776,537 - GFF730 0.47 -0.3 776,537 - GFF730 0.47 +0.7 776,537 - GFF730 0.47 +0.2 776,733 - GFF730 0.65 -2.3 777,334 - -0.5 777,370 - -0.8 777,370 - -1.1 777,390 + -0.0 777,390 + +0.1 777,390 + +1.3 777,391 - -0.6 777,391 - -1.5 777,391 - -0.6 777,391 - +0.6 777,391 - -0.3 777,552 + GFF731 0.18 +0.2 777,552 + GFF731 0.18 +1.3 777,558 + GFF731 0.18 +0.7 777,558 + GFF731 0.18 +0.1 777,784 - GFF731 0.39 +0.3 777,846 + GFF731 0.45 -0.2 777,846 + GFF731 0.45 +1.1 777,877 - GFF731 0.47 -0.1 777,881 - GFF731 0.48 +0.9 777,942 + GFF731 0.53 -0.1 778,000 - GFF731 0.58 +2.2 778,000 - GFF731 0.58 +1.1
Or see this region's nucleotide sequence