Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF699 and GFF700 overlap by 14 nucleotides GFF700 and GFF701 overlap by 4 nucleotides GFF701 and GFF702 are separated by 144 nucleotides GFF702 and GFF703 are separated by 124 nucleotides
GFF699 - Holin-like protein CidA, at 748,399 to 748,839
GFF699
GFF700 - Inner membrane protein YohK, at 748,826 to 749,521
GFF700
GFF701 - Heme A synthase, at 749,518 to 750,594
GFF701
GFF702 - hypothetical protein, at 750,739 to 750,951
GFF702
GFF703 - hypothetical protein, at 751,076 to 752,545
GFF703
Position (kb) 749
750
751 Strain fitness (log2 ratio) -1
0
1 at 748.716 kb on + strand, within GFF699 at 748.716 kb on + strand, within GFF699 at 748.717 kb on - strand, within GFF699 at 748.837 kb on + strand at 748.837 kb on + strand at 748.886 kb on + strand at 748.886 kb on + strand at 748.886 kb on + strand at 749.072 kb on + strand, within GFF700 at 749.072 kb on + strand, within GFF700 at 749.072 kb on + strand, within GFF700 at 749.073 kb on - strand, within GFF700 at 749.073 kb on - strand, within GFF700 at 749.099 kb on + strand, within GFF700 at 749.771 kb on + strand, within GFF701 at 749.900 kb on + strand, within GFF701 at 749.901 kb on - strand, within GFF701 at 750.096 kb on - strand, within GFF701 at 750.096 kb on - strand, within GFF701 at 750.302 kb on + strand, within GFF701 at 750.303 kb on - strand, within GFF701 at 750.518 kb on + strand at 750.518 kb on + strand at 750.519 kb on - strand at 750.654 kb on - strand at 750.871 kb on + strand, within GFF702 at 750.871 kb on + strand, within GFF702 at 750.872 kb on - strand, within GFF702 at 750.872 kb on - strand, within GFF702 at 751.368 kb on + strand, within GFF703 at 751.369 kb on - strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.375 kb on - strand, within GFF703 at 751.375 kb on - strand, within GFF703
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 748,716 + GFF699 0.72 -0.5 748,716 + GFF699 0.72 -1.7 748,717 - GFF699 0.72 -0.3 748,837 + +0.7 748,837 + +0.2 748,886 + -0.8 748,886 + -0.1 748,886 + -0.0 749,072 + GFF700 0.35 +0.9 749,072 + GFF700 0.35 +0.1 749,072 + GFF700 0.35 -1.0 749,073 - GFF700 0.35 -1.3 749,073 - GFF700 0.35 +0.1 749,099 + GFF700 0.39 -1.5 749,771 + GFF701 0.23 +0.6 749,900 + GFF701 0.35 -1.7 749,901 - GFF701 0.36 -0.1 750,096 - GFF701 0.54 -1.1 750,096 - GFF701 0.54 -1.5 750,302 + GFF701 0.73 -0.4 750,303 - GFF701 0.73 +0.8 750,518 + -0.8 750,518 + +0.9 750,519 - +0.3 750,654 - -0.7 750,871 + GFF702 0.62 -0.4 750,871 + GFF702 0.62 +0.1 750,872 - GFF702 0.62 -0.5 750,872 - GFF702 0.62 -0.4 751,368 + GFF703 0.20 +0.4 751,369 - GFF703 0.20 +0.3 751,374 + GFF703 0.20 +0.1 751,374 + GFF703 0.20 +0.7 751,374 + GFF703 0.20 +0.2 751,375 - GFF703 0.20 -0.6 751,375 - GFF703 0.20 +0.0
Or see this region's nucleotide sequence