Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF681 and GFF682 are separated by 348 nucleotides GFF682 and GFF683 are separated by 339 nucleotides GFF683 and GFF684 are separated by 360 nucleotides GFF684 and GFF685 are separated by 81 nucleotides
GFF681 - L-lactate permease, at 730,488 to 732,194
GFF681
GFF682 - hypothetical protein, at 732,543 to 732,668
GFF682
GFF683 - hypothetical protein, at 733,008 to 733,616
GFF683
GFF684 - hypothetical protein, at 733,977 to 734,129
GFF684
GFF685 - hypothetical protein, at 734,211 to 735,014
GFF685
Position (kb) 733
734 Strain fitness (log2 ratio) -2
-1
0
1 at 732.023 kb on - strand, within GFF681 at 732.076 kb on + strand at 732.077 kb on - strand at 732.173 kb on - strand at 732.498 kb on + strand at 732.575 kb on + strand, within GFF682 at 732.576 kb on - strand, within GFF682 at 732.576 kb on - strand, within GFF682 at 732.691 kb on + strand at 732.893 kb on + strand at 732.984 kb on + strand at 732.984 kb on + strand at 732.984 kb on + strand at 732.984 kb on + strand at 733.005 kb on - strand at 733.026 kb on + strand at 733.026 kb on + strand at 733.027 kb on - strand at 733.027 kb on - strand at 733.028 kb on + strand at 733.028 kb on + strand at 733.029 kb on - strand at 733.110 kb on + strand, within GFF683 at 733.111 kb on - strand, within GFF683 at 733.176 kb on + strand, within GFF683 at 733.314 kb on + strand, within GFF683 at 733.315 kb on - strand, within GFF683 at 733.343 kb on + strand, within GFF683 at 733.344 kb on - strand, within GFF683 at 733.344 kb on - strand, within GFF683 at 733.344 kb on - strand, within GFF683 at 733.344 kb on - strand, within GFF683 at 733.473 kb on + strand, within GFF683 at 733.473 kb on + strand, within GFF683 at 733.473 kb on + strand, within GFF683 at 733.474 kb on - strand, within GFF683 at 733.474 kb on - strand, within GFF683 at 733.474 kb on - strand, within GFF683 at 733.614 kb on + strand at 733.664 kb on + strand at 733.890 kb on + strand at 733.890 kb on + strand at 733.891 kb on - strand at 733.912 kb on + strand at 734.006 kb on + strand, within GFF684 at 734.006 kb on + strand, within GFF684 at 734.007 kb on - strand, within GFF684 at 734.171 kb on + strand at 734.171 kb on + strand at 734.172 kb on - strand at 734.277 kb on + strand at 734.277 kb on + strand at 734.278 kb on - strand at 734.580 kb on + strand, within GFF685
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 732,023 - GFF681 0.90 +0.9 732,076 + -0.8 732,077 - -0.0 732,173 - -0.4 732,498 + +0.8 732,575 + GFF682 0.25 -0.9 732,576 - GFF682 0.26 -0.8 732,576 - GFF682 0.26 +0.1 732,691 + -1.4 732,893 + -0.4 732,984 + -0.5 732,984 + +0.1 732,984 + +0.1 732,984 + -0.5 733,005 - -2.5 733,026 + +0.2 733,026 + -0.4 733,027 - +0.4 733,027 - +1.0 733,028 + -1.8 733,028 + +0.2 733,029 - -0.5 733,110 + GFF683 0.17 -0.1 733,111 - GFF683 0.17 -0.9 733,176 + GFF683 0.28 -0.5 733,314 + GFF683 0.50 -0.1 733,315 - GFF683 0.50 -1.3 733,343 + GFF683 0.55 +0.9 733,344 - GFF683 0.55 -0.2 733,344 - GFF683 0.55 -1.9 733,344 - GFF683 0.55 -0.4 733,344 - GFF683 0.55 -0.6 733,473 + GFF683 0.76 +0.0 733,473 + GFF683 0.76 +0.7 733,473 + GFF683 0.76 -0.5 733,474 - GFF683 0.77 -0.0 733,474 - GFF683 0.77 +0.3 733,474 - GFF683 0.77 -0.1 733,614 + +0.2 733,664 + -1.6 733,890 + +0.0 733,890 + +0.9 733,891 - -0.2 733,912 + +0.7 734,006 + GFF684 0.19 -2.1 734,006 + GFF684 0.19 -0.1 734,007 - GFF684 0.20 -0.7 734,171 + +0.2 734,171 + -0.4 734,172 - +0.4 734,277 + +0.4 734,277 + -0.6 734,278 - -0.1 734,580 + GFF685 0.46 +1.2
Or see this region's nucleotide sequence