Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF610 and GFF611 are separated by 91 nucleotides GFF611 and GFF612 are separated by 92 nucleotides GFF612 and GFF613 are separated by 140 nucleotides
GFF610 - Foldase protein PrsA, at 649,768 to 650,709
GFF610
GFF611 - Heat shock protein HspQ, at 650,801 to 651,232
GFF611
GFF612 - Malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase, at 651,325 to 652,365
GFF612
GFF613 - hypothetical protein, at 652,506 to 653,321
GFF613
Position (kb) 651
652
653 Strain fitness (log2 ratio) -1
0
1
2 at 650.387 kb on - strand, within GFF610 at 650.561 kb on - strand, within GFF610 at 650.823 kb on - strand at 650.934 kb on + strand, within GFF611 at 650.934 kb on + strand, within GFF611 at 650.934 kb on + strand, within GFF611 at 650.935 kb on - strand, within GFF611 at 650.935 kb on - strand, within GFF611 at 651.150 kb on + strand, within GFF611 at 651.151 kb on - strand, within GFF611 at 651.151 kb on - strand, within GFF611 at 651.641 kb on + strand, within GFF612 at 651.694 kb on - strand, within GFF612 at 651.762 kb on - strand, within GFF612 at 651.974 kb on + strand, within GFF612 at 651.975 kb on - strand, within GFF612 at 652.110 kb on + strand, within GFF612 at 652.311 kb on - strand at 652.400 kb on - strand at 652.436 kb on - strand at 652.725 kb on + strand, within GFF613 at 652.726 kb on - strand, within GFF613 at 652.897 kb on - strand, within GFF613 at 652.977 kb on + strand, within GFF613 at 652.977 kb on + strand, within GFF613 at 652.978 kb on - strand, within GFF613 at 653.055 kb on + strand, within GFF613 at 653.055 kb on + strand, within GFF613 at 653.055 kb on + strand, within GFF613 at 653.055 kb on + strand, within GFF613 at 653.056 kb on - strand, within GFF613 at 653.056 kb on - strand, within GFF613 at 653.057 kb on + strand, within GFF613 at 653.057 kb on + strand, within GFF613 at 653.267 kb on + strand at 653.274 kb on + strand at 653.275 kb on - strand at 653.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 650,387 - GFF610 0.66 +0.3 650,561 - GFF610 0.84 -0.6 650,823 - +0.1 650,934 + GFF611 0.31 +0.1 650,934 + GFF611 0.31 -1.1 650,934 + GFF611 0.31 +0.6 650,935 - GFF611 0.31 +0.8 650,935 - GFF611 0.31 -0.2 651,150 + GFF611 0.81 -0.4 651,151 - GFF611 0.81 -1.6 651,151 - GFF611 0.81 -0.1 651,641 + GFF612 0.30 -0.9 651,694 - GFF612 0.35 -0.4 651,762 - GFF612 0.42 +0.4 651,974 + GFF612 0.62 -0.8 651,975 - GFF612 0.62 -0.3 652,110 + GFF612 0.75 -0.1 652,311 - -0.4 652,400 - +1.8 652,436 - +0.3 652,725 + GFF613 0.27 -0.5 652,726 - GFF613 0.27 -1.7 652,897 - GFF613 0.48 -0.6 652,977 + GFF613 0.58 +1.2 652,977 + GFF613 0.58 -0.3 652,978 - GFF613 0.58 -0.0 653,055 + GFF613 0.67 -0.4 653,055 + GFF613 0.67 -1.1 653,055 + GFF613 0.67 -1.4 653,055 + GFF613 0.67 +0.2 653,056 - GFF613 0.67 -1.1 653,056 - GFF613 0.67 +0.2 653,057 + GFF613 0.68 -0.0 653,057 + GFF613 0.68 +0.5 653,267 + +0.3 653,274 + -0.1 653,275 - +0.5 653,359 - +0.1
Or see this region's nucleotide sequence