Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF608 and GFF609 are separated by 406 nucleotides GFF609 and GFF610 are separated by 382 nucleotides GFF610 and GFF611 are separated by 91 nucleotides GFF611 and GFF612 are separated by 92 nucleotides
GFF608 - hypothetical protein, at 648,386 to 648,793
GFF608
GFF609 - 50S ribosomal protein L32, at 649,200 to 649,385
GFF609
GFF610 - Foldase protein PrsA, at 649,768 to 650,709
GFF610
GFF611 - Heat shock protein HspQ, at 650,801 to 651,232
GFF611
GFF612 - Malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase, at 651,325 to 652,365
GFF612
Position (kb) 649
650
651 Strain fitness (log2 ratio) -1
0
1 at 649.671 kb on - strand at 649.748 kb on + strand at 649.748 kb on + strand at 649.749 kb on - strand at 649.768 kb on - strand at 650.029 kb on + strand, within GFF610 at 650.029 kb on + strand, within GFF610 at 650.030 kb on - strand, within GFF610 at 650.209 kb on + strand, within GFF610 at 650.387 kb on - strand, within GFF610 at 650.561 kb on - strand, within GFF610 at 650.823 kb on - strand at 650.934 kb on + strand, within GFF611 at 650.934 kb on + strand, within GFF611 at 650.934 kb on + strand, within GFF611 at 650.935 kb on - strand, within GFF611 at 650.935 kb on - strand, within GFF611 at 651.150 kb on + strand, within GFF611 at 651.151 kb on - strand, within GFF611 at 651.151 kb on - strand, within GFF611 at 651.641 kb on + strand, within GFF612 at 651.694 kb on - strand, within GFF612
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 649,671 - -0.7 649,748 + +0.6 649,748 + -0.5 649,749 - +0.2 649,768 - +0.2 650,029 + GFF610 0.28 -0.4 650,029 + GFF610 0.28 -1.1 650,030 - GFF610 0.28 -0.8 650,209 + GFF610 0.47 -0.7 650,387 - GFF610 0.66 +0.3 650,561 - GFF610 0.84 -0.6 650,823 - +0.1 650,934 + GFF611 0.31 +0.1 650,934 + GFF611 0.31 -1.1 650,934 + GFF611 0.31 +0.6 650,935 - GFF611 0.31 +0.8 650,935 - GFF611 0.31 -0.2 651,150 + GFF611 0.81 -0.4 651,151 - GFF611 0.81 -1.6 651,151 - GFF611 0.81 -0.1 651,641 + GFF612 0.30 -0.9 651,694 - GFF612 0.35 -0.4
Or see this region's nucleotide sequence