Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF585 and GFF586 are separated by 20 nucleotides GFF586 and GFF587 are separated by 100 nucleotides GFF587 and GFF588 are separated by 285 nucleotides
GFF585 - hypothetical protein, at 625,955 to 626,968
GFF585
GFF586 - hypothetical protein, at 626,989 to 627,999
GFF586
GFF587 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 628,100 to 628,552
GFF587
GFF588 - Enolase, at 628,838 to 630,121
GFF588
Position (kb) 626
627
628 Strain fitness (log2 ratio) -2
-1
0
1
2 at 626.037 kb on - strand at 626.037 kb on - strand at 626.136 kb on - strand, within GFF585 at 626.189 kb on + strand, within GFF585 at 626.189 kb on + strand, within GFF585 at 626.189 kb on + strand, within GFF585 at 626.423 kb on + strand, within GFF585 at 626.423 kb on + strand, within GFF585 at 626.424 kb on - strand, within GFF585 at 626.424 kb on - strand, within GFF585 at 627.026 kb on + strand at 627.027 kb on - strand at 627.027 kb on - strand at 627.167 kb on + strand, within GFF586 at 627.467 kb on + strand, within GFF586 at 627.468 kb on - strand, within GFF586 at 627.468 kb on - strand, within GFF586 at 627.472 kb on + strand, within GFF586 at 627.633 kb on - strand, within GFF586 at 627.633 kb on - strand, within GFF586 at 627.686 kb on + strand, within GFF586 at 627.687 kb on - strand, within GFF586 at 627.687 kb on - strand, within GFF586 at 627.719 kb on + strand, within GFF586 at 627.719 kb on + strand, within GFF586 at 627.719 kb on + strand, within GFF586 at 627.720 kb on - strand, within GFF586 at 627.720 kb on - strand, within GFF586 at 627.720 kb on - strand, within GFF586 at 627.720 kb on - strand, within GFF586 at 627.720 kb on - strand, within GFF586 at 627.755 kb on + strand, within GFF586 at 627.756 kb on - strand, within GFF586 at 628.212 kb on + strand, within GFF587
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 626,037 - +0.6 626,037 - -1.1 626,136 - GFF585 0.18 -1.5 626,189 + GFF585 0.23 -0.0 626,189 + GFF585 0.23 -0.2 626,189 + GFF585 0.23 +1.3 626,423 + GFF585 0.46 -0.2 626,423 + GFF585 0.46 +0.4 626,424 - GFF585 0.46 -0.7 626,424 - GFF585 0.46 -0.5 627,026 + +0.5 627,027 - -0.6 627,027 - -0.1 627,167 + GFF586 0.18 -0.1 627,467 + GFF586 0.47 +0.3 627,468 - GFF586 0.47 +1.2 627,468 - GFF586 0.47 +2.2 627,472 + GFF586 0.48 +0.3 627,633 - GFF586 0.64 +0.4 627,633 - GFF586 0.64 +0.4 627,686 + GFF586 0.69 -1.1 627,687 - GFF586 0.69 -0.3 627,687 - GFF586 0.69 +2.2 627,719 + GFF586 0.72 -1.0 627,719 + GFF586 0.72 -0.1 627,719 + GFF586 0.72 +0.7 627,720 - GFF586 0.72 +1.0 627,720 - GFF586 0.72 -1.3 627,720 - GFF586 0.72 +0.4 627,720 - GFF586 0.72 -0.2 627,720 - GFF586 0.72 -2.5 627,755 + GFF586 0.76 +0.7 627,756 - GFF586 0.76 +0.4 628,212 + GFF587 0.25 +2.4
Or see this region's nucleotide sequence