Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF545 and GFF546 are separated by 149 nucleotides GFF546 and GFF547 are separated by 6 nucleotides GFF547 and GFF548 are separated by 24 nucleotides GFF548 and GFF549 are separated by 83 nucleotides
GFF545 - hypothetical protein, at 586,943 to 587,551
GFF545
GFF546 - hypothetical protein, at 587,701 to 588,078
GFF546
GFF547 - ATM1-type heavy metal exporter, at 588,085 to 590,040
GFF547
GFF548 - putative protein, at 590,065 to 590,502
GFF548
GFF549 - hypothetical protein, at 590,586 to 591,839
GFF549
Position (kb) 588
589
590
591 Strain fitness (log2 ratio) -1
0
1 at 587.354 kb on - strand, within GFF545 at 587.524 kb on - strand at 587.606 kb on - strand at 587.965 kb on + strand, within GFF546 at 587.966 kb on - strand, within GFF546 at 587.966 kb on - strand, within GFF546 at 588.076 kb on + strand at 588.169 kb on + strand at 588.676 kb on + strand, within GFF547 at 588.676 kb on + strand, within GFF547 at 588.677 kb on - strand, within GFF547 at 588.725 kb on - strand, within GFF547 at 588.832 kb on + strand, within GFF547 at 588.832 kb on + strand, within GFF547 at 588.833 kb on - strand, within GFF547 at 588.833 kb on - strand, within GFF547 at 588.887 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 589.235 kb on - strand, within GFF547 at 589.357 kb on + strand, within GFF547 at 589.357 kb on + strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.455 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.484 kb on - strand, within GFF547 at 589.484 kb on - strand, within GFF547 at 589.719 kb on + strand, within GFF547 at 589.891 kb on + strand at 589.891 kb on + strand at 589.892 kb on - strand at 589.892 kb on - strand at 590.120 kb on + strand, within GFF548 at 590.120 kb on + strand, within GFF548 at 590.307 kb on - strand, within GFF548 at 590.307 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.494 kb on - strand at 590.732 kb on - strand, within GFF549 at 590.957 kb on - strand, within GFF549
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 587,354 - GFF545 0.67 -0.9 587,524 - -0.1 587,606 - -1.7 587,965 + GFF546 0.70 -0.6 587,966 - GFF546 0.70 -0.3 587,966 - GFF546 0.70 +0.3 588,076 + -0.3 588,169 + +0.5 588,676 + GFF547 0.30 +0.2 588,676 + GFF547 0.30 -0.6 588,677 - GFF547 0.30 +1.2 588,725 - GFF547 0.33 -0.3 588,832 + GFF547 0.38 +0.4 588,832 + GFF547 0.38 -0.2 588,833 - GFF547 0.38 -1.7 588,833 - GFF547 0.38 +0.3 588,887 - GFF547 0.41 -0.3 588,911 - GFF547 0.42 -1.0 588,911 - GFF547 0.42 -1.4 588,911 - GFF547 0.42 -0.3 588,911 - GFF547 0.42 +0.2 588,911 - GFF547 0.42 +0.6 589,235 - GFF547 0.59 +1.2 589,357 + GFF547 0.65 -0.1 589,357 + GFF547 0.65 -0.1 589,358 - GFF547 0.65 +0.6 589,358 - GFF547 0.65 +0.5 589,358 - GFF547 0.65 +0.9 589,358 - GFF547 0.65 +0.2 589,455 + GFF547 0.70 -0.3 589,483 + GFF547 0.71 +0.1 589,483 + GFF547 0.71 -0.5 589,483 + GFF547 0.71 +0.7 589,484 - GFF547 0.72 +0.8 589,484 - GFF547 0.72 -0.7 589,719 + GFF547 0.84 -0.7 589,891 + -0.2 589,891 + -0.9 589,892 - -0.4 589,892 - -0.9 590,120 + GFF548 0.13 +1.2 590,120 + GFF548 0.13 +0.0 590,307 - GFF548 0.55 +0.8 590,307 - GFF548 0.55 +0.0 590,424 - GFF548 0.82 -1.0 590,424 - GFF548 0.82 +0.3 590,424 - GFF548 0.82 +0.9 590,494 - -0.1 590,732 - GFF549 0.12 -0.5 590,957 - GFF549 0.30 -0.1
Or see this region's nucleotide sequence