Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4856 and GFF4857 are separated by 11 nucleotides GFF4857 and GFF4858 are separated by 129 nucleotides
GFF4856 - hypothetical protein, at 11,472 to 13,100
GFF4856
GFF4857 - hypothetical protein, at 13,112 to 13,594
GFF4857
GFF4858 - hypothetical protein, at 13,724 to 14,311
GFF4858
Position (kb) 13
14 Strain fitness (log2 ratio) -2
-1
0
1 at 12.179 kb on - strand, within GFF4856 at 12.337 kb on - strand, within GFF4856 at 12.495 kb on + strand, within GFF4856 at 12.663 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.750 kb on + strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.751 kb on - strand, within GFF4856 at 12.954 kb on + strand at 12.955 kb on - strand at 12.955 kb on - strand at 12.955 kb on - strand at 13.108 kb on + strand at 13.109 kb on - strand at 13.181 kb on + strand, within GFF4857 at 13.181 kb on + strand, within GFF4857 at 13.181 kb on + strand, within GFF4857 at 13.182 kb on - strand, within GFF4857 at 13.182 kb on - strand, within GFF4857 at 13.182 kb on - strand, within GFF4857 at 13.313 kb on + strand, within GFF4857 at 13.314 kb on - strand, within GFF4857 at 13.617 kb on - strand at 13.648 kb on + strand at 13.785 kb on + strand, within GFF4858 at 13.785 kb on + strand, within GFF4858 at 13.786 kb on - strand, within GFF4858 at 13.786 kb on - strand, within GFF4858 at 13.800 kb on + strand, within GFF4858 at 13.800 kb on + strand, within GFF4858 at 13.800 kb on + strand, within GFF4858 at 13.801 kb on - strand, within GFF4858 at 13.801 kb on - strand, within GFF4858 at 13.801 kb on - strand, within GFF4858 at 13.941 kb on + strand, within GFF4858 at 13.942 kb on - strand, within GFF4858 at 13.942 kb on - strand, within GFF4858 at 13.972 kb on - strand, within GFF4858 at 13.982 kb on + strand, within GFF4858 at 14.010 kb on + strand, within GFF4858 at 14.082 kb on + strand, within GFF4858 at 14.083 kb on - strand, within GFF4858 at 14.083 kb on - strand, within GFF4858 at 14.148 kb on + strand, within GFF4858 at 14.149 kb on - strand, within GFF4858 at 14.272 kb on + strand at 14.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 12,179 - GFF4856 0.43 -1.3 12,337 - GFF4856 0.53 +0.6 12,495 + GFF4856 0.63 -0.2 12,663 + GFF4856 0.73 -0.6 12,750 + GFF4856 0.78 -0.2 12,750 + GFF4856 0.78 -1.7 12,750 + GFF4856 0.78 -0.1 12,750 + GFF4856 0.78 -0.4 12,750 + GFF4856 0.78 +0.1 12,750 + GFF4856 0.78 -0.3 12,750 + GFF4856 0.78 -1.2 12,750 + GFF4856 0.78 -0.4 12,750 + GFF4856 0.78 -0.6 12,750 + GFF4856 0.78 -0.2 12,751 - GFF4856 0.79 +0.7 12,751 - GFF4856 0.79 -0.0 12,751 - GFF4856 0.79 -1.5 12,751 - GFF4856 0.79 +0.5 12,751 - GFF4856 0.79 -0.1 12,751 - GFF4856 0.79 +0.7 12,751 - GFF4856 0.79 +0.7 12,751 - GFF4856 0.79 -1.1 12,751 - GFF4856 0.79 -1.6 12,954 + -0.4 12,955 - -0.8 12,955 - -0.2 12,955 - +0.1 13,108 + -0.6 13,109 - -0.6 13,181 + GFF4857 0.14 +0.5 13,181 + GFF4857 0.14 +0.1 13,181 + GFF4857 0.14 -0.6 13,182 - GFF4857 0.14 -2.3 13,182 - GFF4857 0.14 -1.1 13,182 - GFF4857 0.14 -0.8 13,313 + GFF4857 0.42 -0.9 13,314 - GFF4857 0.42 -1.2 13,617 - -0.2 13,648 + +0.4 13,785 + GFF4858 0.10 +0.2 13,785 + GFF4858 0.10 -1.0 13,786 - GFF4858 0.11 +0.7 13,786 - GFF4858 0.11 -0.2 13,800 + GFF4858 0.13 -0.4 13,800 + GFF4858 0.13 -0.9 13,800 + GFF4858 0.13 -1.4 13,801 - GFF4858 0.13 +0.2 13,801 - GFF4858 0.13 -0.5 13,801 - GFF4858 0.13 -1.1 13,941 + GFF4858 0.37 -0.6 13,942 - GFF4858 0.37 +0.9 13,942 - GFF4858 0.37 -1.3 13,972 - GFF4858 0.42 -0.4 13,982 + GFF4858 0.44 +0.0 14,010 + GFF4858 0.49 -0.4 14,082 + GFF4858 0.61 -0.6 14,083 - GFF4858 0.61 +0.6 14,083 - GFF4858 0.61 +0.8 14,148 + GFF4858 0.72 +1.3 14,149 - GFF4858 0.72 +0.2 14,272 + +0.2 14,273 - +0.4
Or see this region's nucleotide sequence