Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4729 and GFF4730 are separated by 101 nucleotides GFF4730 and GFF4731 are separated by 129 nucleotides
GFF4729 - hypothetical protein, at 138,920 to 141,049
GFF4729
GFF4730 - hypothetical protein, at 141,151 to 142,128
GFF4730
GFF4731 - hypothetical protein, at 142,258 to 143,436
GFF4731
Position (kb) 141
142
143 Strain fitness (log2 ratio) -2
-1
0
1 at 140.442 kb on + strand, within GFF4729 at 140.442 kb on + strand, within GFF4729 at 140.442 kb on + strand, within GFF4729 at 140.443 kb on - strand, within GFF4729 at 140.443 kb on - strand, within GFF4729 at 140.443 kb on - strand, within GFF4729 at 140.457 kb on + strand, within GFF4729 at 140.458 kb on - strand, within GFF4729 at 140.502 kb on + strand, within GFF4729 at 140.502 kb on + strand, within GFF4729 at 140.503 kb on - strand, within GFF4729 at 140.630 kb on + strand, within GFF4729 at 140.630 kb on + strand, within GFF4729 at 140.630 kb on + strand, within GFF4729 at 140.630 kb on + strand, within GFF4729 at 140.631 kb on - strand, within GFF4729 at 140.631 kb on - strand, within GFF4729 at 140.697 kb on + strand, within GFF4729 at 140.697 kb on + strand, within GFF4729 at 140.698 kb on - strand, within GFF4729 at 140.713 kb on - strand, within GFF4729 at 140.713 kb on - strand, within GFF4729 at 140.731 kb on - strand, within GFF4729 at 140.735 kb on + strand, within GFF4729 at 140.735 kb on + strand, within GFF4729 at 140.736 kb on - strand, within GFF4729 at 141.138 kb on + strand at 141.139 kb on - strand at 141.287 kb on + strand, within GFF4730 at 141.287 kb on + strand, within GFF4730 at 141.287 kb on + strand, within GFF4730 at 141.288 kb on - strand, within GFF4730 at 141.308 kb on + strand, within GFF4730 at 141.308 kb on + strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.392 kb on + strand, within GFF4730 at 141.392 kb on + strand, within GFF4730 at 141.393 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.611 kb on + strand, within GFF4730 at 141.611 kb on + strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.653 kb on + strand, within GFF4730 at 141.749 kb on + strand, within GFF4730 at 141.758 kb on + strand, within GFF4730 at 141.759 kb on - strand, within GFF4730 at 141.986 kb on + strand, within GFF4730 at 142.181 kb on + strand at 142.181 kb on + strand at 142.181 kb on + strand at 142.220 kb on + strand at 142.220 kb on + strand at 142.287 kb on - strand at 142.992 kb on + strand, within GFF4731 at 142.993 kb on - strand, within GFF4731
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 140,442 + GFF4729 0.71 -0.3 140,442 + GFF4729 0.71 +0.3 140,442 + GFF4729 0.71 -0.1 140,443 - GFF4729 0.72 -1.4 140,443 - GFF4729 0.72 +0.2 140,443 - GFF4729 0.72 +0.2 140,457 + GFF4729 0.72 +0.4 140,458 - GFF4729 0.72 -0.8 140,502 + GFF4729 0.74 -0.0 140,502 + GFF4729 0.74 -0.2 140,503 - GFF4729 0.74 -0.5 140,630 + GFF4729 0.80 +0.2 140,630 + GFF4729 0.80 +0.8 140,630 + GFF4729 0.80 -0.0 140,630 + GFF4729 0.80 -0.6 140,631 - GFF4729 0.80 +0.3 140,631 - GFF4729 0.80 +0.4 140,697 + GFF4729 0.83 +0.5 140,697 + GFF4729 0.83 +0.1 140,698 - GFF4729 0.83 -0.2 140,713 - GFF4729 0.84 +0.0 140,713 - GFF4729 0.84 -0.9 140,731 - GFF4729 0.85 -1.0 140,735 + GFF4729 0.85 -0.1 140,735 + GFF4729 0.85 +0.6 140,736 - GFF4729 0.85 +0.6 141,138 + -0.2 141,139 - +0.5 141,287 + GFF4730 0.14 +0.3 141,287 + GFF4730 0.14 +0.5 141,287 + GFF4730 0.14 -0.9 141,288 - GFF4730 0.14 -0.3 141,308 + GFF4730 0.16 -0.3 141,308 + GFF4730 0.16 -0.0 141,309 - GFF4730 0.16 -1.3 141,309 - GFF4730 0.16 -0.3 141,309 - GFF4730 0.16 +0.2 141,392 + GFF4730 0.25 +1.5 141,392 + GFF4730 0.25 -0.3 141,393 - GFF4730 0.25 +0.5 141,588 - GFF4730 0.45 -0.7 141,588 - GFF4730 0.45 -0.3 141,588 - GFF4730 0.45 +0.2 141,588 - GFF4730 0.45 +0.4 141,611 + GFF4730 0.47 -0.3 141,611 + GFF4730 0.47 +1.1 141,612 - GFF4730 0.47 -0.9 141,612 - GFF4730 0.47 -0.1 141,612 - GFF4730 0.47 +0.3 141,612 - GFF4730 0.47 +0.7 141,653 + GFF4730 0.51 +1.2 141,749 + GFF4730 0.61 +0.5 141,758 + GFF4730 0.62 -0.2 141,759 - GFF4730 0.62 +0.5 141,986 + GFF4730 0.85 -0.8 142,181 + -0.2 142,181 + -0.6 142,181 + +0.4 142,220 + +0.4 142,220 + -2.5 142,287 - -0.6 142,992 + GFF4731 0.62 -1.8 142,993 - GFF4731 0.62 +0.4
Or see this region's nucleotide sequence