Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4725 and GFF4726 are separated by 178 nucleotides GFF4726 and GFF4727 are separated by 24 nucleotides GFF4727 and GFF4728 are separated by 61 nucleotides
GFF4725 - Bifunctional transcriptional activator/DNA repair enzyme Ada, at 135,932 to 137,011
GFF4725
GFF4726 - hypothetical protein, at 137,190 to 137,870
GFF4726
GFF4727 - hypothetical protein, at 137,895 to 138,491
GFF4727
GFF4728 - hypothetical protein, at 138,553 to 138,885
GFF4728
Position (kb) 137
138 Strain fitness (log2 ratio) -1
0
1 at 136.270 kb on + strand, within GFF4725 at 136.271 kb on - strand, within GFF4725 at 136.436 kb on + strand, within GFF4725 at 136.474 kb on + strand, within GFF4725 at 136.474 kb on + strand, within GFF4725 at 136.475 kb on - strand, within GFF4725 at 136.491 kb on + strand, within GFF4725 at 136.492 kb on - strand, within GFF4725 at 136.524 kb on + strand, within GFF4725 at 136.525 kb on - strand, within GFF4725 at 136.525 kb on - strand, within GFF4725 at 136.602 kb on + strand, within GFF4725 at 136.887 kb on + strand, within GFF4725 at 136.887 kb on + strand, within GFF4725 at 136.887 kb on + strand, within GFF4725 at 136.888 kb on - strand, within GFF4725 at 136.888 kb on - strand, within GFF4725 at 136.888 kb on - strand, within GFF4725 at 136.912 kb on - strand at 137.016 kb on - strand at 137.089 kb on + strand at 137.089 kb on + strand at 137.090 kb on - strand at 137.230 kb on - strand at 137.252 kb on + strand at 137.252 kb on + strand at 137.253 kb on - strand at 137.566 kb on + strand, within GFF4726 at 137.745 kb on - strand, within GFF4726 at 137.745 kb on - strand, within GFF4726 at 137.745 kb on - strand, within GFF4726 at 137.827 kb on - strand at 138.028 kb on + strand, within GFF4727 at 138.029 kb on - strand, within GFF4727 at 138.029 kb on - strand, within GFF4727 at 138.067 kb on + strand, within GFF4727 at 138.067 kb on + strand, within GFF4727 at 138.529 kb on - strand at 138.711 kb on - strand, within GFF4728 at 138.826 kb on + strand, within GFF4728 at 138.826 kb on + strand, within GFF4728
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 136,270 + GFF4725 0.31 -0.2 136,271 - GFF4725 0.31 -0.4 136,436 + GFF4725 0.47 -0.7 136,474 + GFF4725 0.50 +0.3 136,474 + GFF4725 0.50 -0.0 136,475 - GFF4725 0.50 +0.9 136,491 + GFF4725 0.52 +0.8 136,492 - GFF4725 0.52 +1.0 136,524 + GFF4725 0.55 +0.5 136,525 - GFF4725 0.55 +0.9 136,525 - GFF4725 0.55 -0.5 136,602 + GFF4725 0.62 -0.7 136,887 + GFF4725 0.88 -0.3 136,887 + GFF4725 0.88 -0.8 136,887 + GFF4725 0.88 -0.2 136,888 - GFF4725 0.89 +0.7 136,888 - GFF4725 0.89 +0.7 136,888 - GFF4725 0.89 -1.6 136,912 - -0.5 137,016 - -0.8 137,089 + +0.4 137,089 + -0.4 137,090 - +0.2 137,230 - -0.1 137,252 + +0.8 137,252 + +1.0 137,253 - +0.0 137,566 + GFF4726 0.55 -0.6 137,745 - GFF4726 0.81 -0.5 137,745 - GFF4726 0.81 -0.2 137,745 - GFF4726 0.81 -0.2 137,827 - +0.2 138,028 + GFF4727 0.22 -0.3 138,029 - GFF4727 0.22 -0.3 138,029 - GFF4727 0.22 +0.3 138,067 + GFF4727 0.29 -1.2 138,067 + GFF4727 0.29 -0.6 138,529 - +0.1 138,711 - GFF4728 0.47 +0.9 138,826 + GFF4728 0.82 -0.8 138,826 + GFF4728 0.82 -1.5
Or see this region's nucleotide sequence