Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF469 and GFF470 are separated by 4 nucleotides GFF470 and GFF471 are separated by 180 nucleotides
GFF469 - hypothetical protein, at 495,244 to 496,245
GFF469
GFF470 - High-affinity branched-chain amino acid transport system permease protein LivH, at 496,250 to 497,131
GFF470
GFF471 - hypothetical protein, at 497,312 to 498,247
GFF471
Position (kb) 496
497
498 Strain fitness (log2 ratio) -2
-1
0
1
2 at 495.395 kb on + strand, within GFF469 at 495.422 kb on + strand, within GFF469 at 495.422 kb on + strand, within GFF469 at 495.422 kb on + strand, within GFF469 at 495.423 kb on - strand, within GFF469 at 495.503 kb on + strand, within GFF469 at 495.504 kb on - strand, within GFF469 at 495.504 kb on - strand, within GFF469 at 495.521 kb on + strand, within GFF469 at 495.521 kb on + strand, within GFF469 at 495.522 kb on - strand, within GFF469 at 495.522 kb on - strand, within GFF469 at 495.863 kb on + strand, within GFF469 at 495.864 kb on - strand, within GFF469 at 495.864 kb on - strand, within GFF469 at 495.962 kb on + strand, within GFF469 at 495.990 kb on - strand, within GFF469 at 495.990 kb on - strand, within GFF469 at 495.990 kb on - strand, within GFF469 at 496.040 kb on + strand, within GFF469 at 496.107 kb on + strand, within GFF469 at 496.112 kb on + strand, within GFF469 at 496.339 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.356 kb on + strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.357 kb on - strand, within GFF470 at 496.482 kb on + strand, within GFF470 at 496.765 kb on - strand, within GFF470 at 497.070 kb on + strand at 497.070 kb on + strand at 497.071 kb on - strand at 497.071 kb on - strand at 497.514 kb on + strand, within GFF471 at 497.514 kb on + strand, within GFF471 at 497.541 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.610 kb on + strand, within GFF471 at 497.611 kb on - strand, within GFF471 at 497.611 kb on - strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.757 kb on + strand, within GFF471 at 497.758 kb on - strand, within GFF471 at 497.758 kb on - strand, within GFF471 at 497.823 kb on + strand, within GFF471 at 497.823 kb on + strand, within GFF471 at 497.824 kb on - strand, within GFF471 at 497.881 kb on - strand, within GFF471
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 495,395 + GFF469 0.15 -0.1 495,422 + GFF469 0.18 +0.7 495,422 + GFF469 0.18 -1.4 495,422 + GFF469 0.18 -0.0 495,423 - GFF469 0.18 -0.8 495,503 + GFF469 0.26 -1.8 495,504 - GFF469 0.26 -0.4 495,504 - GFF469 0.26 -0.3 495,521 + GFF469 0.28 +0.3 495,521 + GFF469 0.28 +0.1 495,522 - GFF469 0.28 +0.3 495,522 - GFF469 0.28 +0.8 495,863 + GFF469 0.62 -0.1 495,864 - GFF469 0.62 -0.9 495,864 - GFF469 0.62 -0.6 495,962 + GFF469 0.72 +1.1 495,990 - GFF469 0.74 +0.2 495,990 - GFF469 0.74 -0.7 495,990 - GFF469 0.74 -0.6 496,040 + GFF469 0.79 +0.7 496,107 + GFF469 0.86 -0.3 496,112 + GFF469 0.87 -1.5 496,339 + GFF470 0.10 +0.8 496,356 + GFF470 0.12 -0.8 496,356 + GFF470 0.12 +0.6 496,356 + GFF470 0.12 +0.2 496,356 + GFF470 0.12 -0.4 496,356 + GFF470 0.12 +0.4 496,356 + GFF470 0.12 +0.1 496,356 + GFF470 0.12 -0.4 496,356 + GFF470 0.12 +0.1 496,357 - GFF470 0.12 +0.5 496,357 - GFF470 0.12 -1.1 496,357 - GFF470 0.12 -0.8 496,482 + GFF470 0.26 -0.6 496,765 - GFF470 0.58 +0.0 497,070 + +0.5 497,070 + +0.2 497,071 - +1.1 497,071 - -0.9 497,514 + GFF471 0.22 +0.3 497,514 + GFF471 0.22 -0.3 497,541 + GFF471 0.24 -0.2 497,610 + GFF471 0.32 -1.7 497,610 + GFF471 0.32 +0.8 497,610 + GFF471 0.32 -0.2 497,611 - GFF471 0.32 -0.3 497,611 - GFF471 0.32 -0.4 497,757 + GFF471 0.48 -0.0 497,757 + GFF471 0.48 -0.5 497,757 + GFF471 0.48 +0.1 497,757 + GFF471 0.48 +0.6 497,757 + GFF471 0.48 +2.7 497,758 - GFF471 0.48 -0.9 497,758 - GFF471 0.48 +0.2 497,823 + GFF471 0.55 -0.7 497,823 + GFF471 0.55 -1.4 497,824 - GFF471 0.55 -0.9 497,881 - GFF471 0.61 -0.4
Or see this region's nucleotide sequence