Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4646 and GFF4647 are separated by 74 nucleotides GFF4647 and GFF4648 are separated by 28 nucleotides GFF4648 and GFF4649 are separated by 82 nucleotides
GFF4646 - DNA gyrase inhibitor YacG, at 55,874 to 56,080
GFF4646
GFF4647 - hypothetical protein, at 56,155 to 57,033
GFF4647
GFF4648 - hypothetical protein, at 57,062 to 57,700
GFF4648
GFF4649 - NADP/NAD-dependent aldehyde dehydrogenase PuuC, at 57,783 to 59,264
GFF4649
Position (kb) 57
58 Strain fitness (log2 ratio) -2
-1
0
1 at 56.182 kb on + strand at 56.183 kb on - strand at 56.217 kb on + strand at 56.217 kb on + strand at 56.217 kb on + strand at 56.217 kb on + strand at 56.217 kb on + strand at 56.218 kb on - strand at 56.218 kb on - strand at 56.249 kb on + strand, within GFF4647 at 56.249 kb on + strand, within GFF4647 at 56.249 kb on + strand, within GFF4647 at 56.250 kb on - strand, within GFF4647 at 56.275 kb on + strand, within GFF4647 at 56.275 kb on + strand, within GFF4647 at 56.276 kb on - strand, within GFF4647 at 56.276 kb on - strand, within GFF4647 at 56.342 kb on - strand, within GFF4647 at 56.441 kb on + strand, within GFF4647 at 56.442 kb on - strand, within GFF4647 at 56.442 kb on - strand, within GFF4647 at 56.505 kb on + strand, within GFF4647 at 56.548 kb on + strand, within GFF4647 at 56.549 kb on - strand, within GFF4647 at 56.602 kb on + strand, within GFF4647 at 56.603 kb on - strand, within GFF4647 at 56.668 kb on + strand, within GFF4647 at 56.669 kb on - strand, within GFF4647 at 56.674 kb on + strand, within GFF4647 at 56.702 kb on - strand, within GFF4647 at 56.753 kb on + strand, within GFF4647 at 56.779 kb on + strand, within GFF4647 at 56.939 kb on - strand, within GFF4647 at 57.087 kb on + strand at 57.087 kb on + strand at 57.097 kb on + strand at 57.200 kb on + strand, within GFF4648 at 57.200 kb on + strand, within GFF4648 at 57.201 kb on - strand, within GFF4648 at 57.201 kb on - strand, within GFF4648 at 57.240 kb on + strand, within GFF4648 at 57.240 kb on + strand, within GFF4648 at 57.241 kb on - strand, within GFF4648 at 57.248 kb on + strand, within GFF4648 at 57.249 kb on - strand, within GFF4648 at 57.398 kb on + strand, within GFF4648 at 57.423 kb on - strand, within GFF4648 at 57.423 kb on - strand, within GFF4648 at 57.423 kb on - strand, within GFF4648 at 57.423 kb on - strand, within GFF4648 at 57.674 kb on + strand at 57.674 kb on + strand at 57.674 kb on + strand at 57.675 kb on - strand at 57.675 kb on - strand at 57.675 kb on - strand at 57.675 kb on - strand at 58.158 kb on + strand, within GFF4649 at 58.158 kb on + strand, within GFF4649 at 58.159 kb on - strand, within GFF4649 at 58.161 kb on + strand, within GFF4649 at 58.185 kb on + strand, within GFF4649 at 58.185 kb on + strand, within GFF4649 at 58.186 kb on - strand, within GFF4649 at 58.522 kb on - strand, within GFF4649 at 58.654 kb on - strand, within GFF4649
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 56,182 + +0.6 56,183 - -0.9 56,217 + -0.3 56,217 + +0.2 56,217 + +0.2 56,217 + -1.5 56,217 + -0.6 56,218 - -0.1 56,218 - -0.6 56,249 + GFF4647 0.11 -0.2 56,249 + GFF4647 0.11 +0.2 56,249 + GFF4647 0.11 +0.7 56,250 - GFF4647 0.11 +0.8 56,275 + GFF4647 0.14 -0.5 56,275 + GFF4647 0.14 -1.9 56,276 - GFF4647 0.14 +0.4 56,276 - GFF4647 0.14 -0.3 56,342 - GFF4647 0.21 -0.0 56,441 + GFF4647 0.33 -0.1 56,442 - GFF4647 0.33 -0.9 56,442 - GFF4647 0.33 +0.7 56,505 + GFF4647 0.40 +0.8 56,548 + GFF4647 0.45 -0.2 56,549 - GFF4647 0.45 +0.7 56,602 + GFF4647 0.51 -0.2 56,603 - GFF4647 0.51 -0.4 56,668 + GFF4647 0.58 +1.3 56,669 - GFF4647 0.58 -0.3 56,674 + GFF4647 0.59 +0.7 56,702 - GFF4647 0.62 -0.8 56,753 + GFF4647 0.68 -0.4 56,779 + GFF4647 0.71 -0.9 56,939 - GFF4647 0.89 -0.3 57,087 + -0.6 57,087 + +0.5 57,097 + -0.1 57,200 + GFF4648 0.22 -0.1 57,200 + GFF4648 0.22 +0.7 57,201 - GFF4648 0.22 -0.4 57,201 - GFF4648 0.22 -2.2 57,240 + GFF4648 0.28 -0.3 57,240 + GFF4648 0.28 +0.1 57,241 - GFF4648 0.28 +0.6 57,248 + GFF4648 0.29 -0.0 57,249 - GFF4648 0.29 +1.4 57,398 + GFF4648 0.53 +0.2 57,423 - GFF4648 0.56 -0.3 57,423 - GFF4648 0.56 -0.6 57,423 - GFF4648 0.56 +0.0 57,423 - GFF4648 0.56 +0.2 57,674 + +0.2 57,674 + -0.3 57,674 + -0.2 57,675 - -0.4 57,675 - -0.8 57,675 - +0.2 57,675 - +0.3 58,158 + GFF4649 0.25 -0.1 58,158 + GFF4649 0.25 +0.1 58,159 - GFF4649 0.25 -0.1 58,161 + GFF4649 0.26 +0.1 58,185 + GFF4649 0.27 +1.0 58,185 + GFF4649 0.27 -0.1 58,186 - GFF4649 0.27 +0.8 58,522 - GFF4649 0.50 -0.5 58,654 - GFF4649 0.59 +0.1
Or see this region's nucleotide sequence