Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4630 and GFF4631 are separated by 47 nucleotides GFF4631 and GFF4632 are separated by 8 nucleotides
GFF4630 - Riboflavin transporter RfnT, at 39,154 to 40,239
GFF4630
GFF4631 - Gluconate 5-dehydrogenase, at 40,287 to 41,042
GFF4631
GFF4632 - Trk system potassium uptake protein TrkI, at 41,051 to 42,559
GFF4632
Position (kb) 40
41
42 Strain fitness (log2 ratio) -2
-1
0
1 at 40.749 kb on + strand, within GFF4631 at 40.750 kb on - strand, within GFF4631 at 40.989 kb on + strand at 40.989 kb on + strand at 40.990 kb on - strand at 41.026 kb on - strand at 41.026 kb on - strand at 41.301 kb on + strand, within GFF4632 at 41.301 kb on + strand, within GFF4632 at 41.302 kb on - strand, within GFF4632 at 41.302 kb on - strand, within GFF4632 at 41.392 kb on - strand, within GFF4632 at 41.535 kb on + strand, within GFF4632 at 41.687 kb on + strand, within GFF4632 at 41.740 kb on - strand, within GFF4632 at 41.740 kb on - strand, within GFF4632 at 41.787 kb on + strand, within GFF4632 at 41.787 kb on + strand, within GFF4632 at 41.788 kb on - strand, within GFF4632 at 41.788 kb on - strand, within GFF4632 at 41.788 kb on - strand, within GFF4632 at 41.908 kb on - strand, within GFF4632 at 41.908 kb on - strand, within GFF4632 at 41.940 kb on + strand, within GFF4632 at 41.940 kb on + strand, within GFF4632 at 41.941 kb on - strand, within GFF4632 at 41.941 kb on - strand, within GFF4632 at 41.941 kb on - strand, within GFF4632 at 41.941 kb on - strand, within GFF4632
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 40,749 + GFF4631 0.61 -0.6 40,750 - GFF4631 0.61 -0.1 40,989 + +0.4 40,989 + +1.5 40,990 - -0.5 41,026 - +0.9 41,026 - -0.9 41,301 + GFF4632 0.17 +0.1 41,301 + GFF4632 0.17 -0.2 41,302 - GFF4632 0.17 -0.6 41,302 - GFF4632 0.17 -0.4 41,392 - GFF4632 0.23 -2.2 41,535 + GFF4632 0.32 +1.1 41,687 + GFF4632 0.42 -0.6 41,740 - GFF4632 0.46 -1.0 41,740 - GFF4632 0.46 +1.4 41,787 + GFF4632 0.49 +0.7 41,787 + GFF4632 0.49 +0.2 41,788 - GFF4632 0.49 -0.1 41,788 - GFF4632 0.49 -0.3 41,788 - GFF4632 0.49 +0.6 41,908 - GFF4632 0.57 -0.4 41,908 - GFF4632 0.57 -0.7 41,940 + GFF4632 0.59 +0.5 41,940 + GFF4632 0.59 -0.8 41,941 - GFF4632 0.59 -0.3 41,941 - GFF4632 0.59 +0.6 41,941 - GFF4632 0.59 -0.8 41,941 - GFF4632 0.59 -1.6
Or see this region's nucleotide sequence