Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4574 and GFF4575 are separated by 349 nucleotides GFF4575 and GFF4576 are separated by 1 nucleotides GFF4576 and GFF4577 are separated by 2 nucleotides
GFF4574 - Dihydroxy-acid dehydratase, at 161,094 to 162,947
GFF4574
GFF4575 - Tryptophan decarboxylase, at 163,297 to 164,709
GFF4575
GFF4576 - hypothetical protein, at 164,711 to 165,289
GFF4576
GFF4577 - Chromosomal replication initiator protein DnaA, at 165,292 to 165,675
GFF4577
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2 at 162.948 kb on - strand at 163.081 kb on + strand at 163.082 kb on - strand at 163.125 kb on + strand at 163.125 kb on + strand at 163.125 kb on + strand at 163.126 kb on - strand at 163.126 kb on - strand at 163.126 kb on - strand at 163.126 kb on - strand at 163.126 kb on - strand at 163.126 kb on - strand at 163.252 kb on + strand at 163.252 kb on + strand at 163.355 kb on - strand at 163.355 kb on - strand at 163.730 kb on + strand, within GFF4575 at 163.730 kb on + strand, within GFF4575 at 163.731 kb on - strand, within GFF4575 at 163.731 kb on - strand, within GFF4575 at 163.817 kb on - strand, within GFF4575 at 163.836 kb on + strand, within GFF4575 at 163.837 kb on - strand, within GFF4575 at 163.837 kb on - strand, within GFF4575 at 164.024 kb on + strand, within GFF4575 at 164.028 kb on + strand, within GFF4575 at 164.028 kb on + strand, within GFF4575 at 164.028 kb on + strand, within GFF4575 at 164.028 kb on + strand, within GFF4575 at 164.029 kb on - strand, within GFF4575 at 164.029 kb on - strand, within GFF4575 at 164.267 kb on - strand, within GFF4575 at 164.302 kb on + strand, within GFF4575 at 164.302 kb on + strand, within GFF4575 at 164.302 kb on + strand, within GFF4575 at 164.302 kb on + strand, within GFF4575 at 164.302 kb on + strand, within GFF4575 at 164.303 kb on - strand, within GFF4575 at 164.379 kb on + strand, within GFF4575 at 164.581 kb on + strand at 164.916 kb on - strand, within GFF4576 at 165.467 kb on + strand, within GFF4577 at 165.467 kb on + strand, within GFF4577
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 162,948 - +0.8 163,081 + -1.9 163,082 - -2.0 163,125 + +0.0 163,125 + -0.9 163,125 + +0.2 163,126 - +0.1 163,126 - -0.8 163,126 - +0.3 163,126 - -1.0 163,126 - -0.9 163,126 - -0.5 163,252 + -0.1 163,252 + -0.7 163,355 - -0.6 163,355 - -0.4 163,730 + GFF4575 0.31 -1.6 163,730 + GFF4575 0.31 -0.8 163,731 - GFF4575 0.31 +0.9 163,731 - GFF4575 0.31 -1.4 163,817 - GFF4575 0.37 +1.1 163,836 + GFF4575 0.38 -1.0 163,837 - GFF4575 0.38 +1.0 163,837 - GFF4575 0.38 -0.7 164,024 + GFF4575 0.51 +0.6 164,028 + GFF4575 0.52 -0.2 164,028 + GFF4575 0.52 +0.3 164,028 + GFF4575 0.52 +1.0 164,028 + GFF4575 0.52 +1.5 164,029 - GFF4575 0.52 +0.3 164,029 - GFF4575 0.52 -0.6 164,267 - GFF4575 0.69 +0.4 164,302 + GFF4575 0.71 +0.1 164,302 + GFF4575 0.71 +0.0 164,302 + GFF4575 0.71 -0.3 164,302 + GFF4575 0.71 -0.9 164,302 + GFF4575 0.71 -0.9 164,303 - GFF4575 0.71 +1.9 164,379 + GFF4575 0.77 -0.3 164,581 + -0.3 164,916 - GFF4576 0.35 -1.9 165,467 + GFF4577 0.46 +0.9 165,467 + GFF4577 0.46 +0.9
Or see this region's nucleotide sequence