Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF454 and GFF455 are separated by 226 nucleotides GFF455 and GFF456 are separated by 15 nucleotides
GFF454 - Sensor protein QseC, at 482,099 to 483,481
GFF454
GFF455 - Riboflavin transport system permease protein RibX, at 483,708 to 484,592
GFF455
GFF456 - Bicarbonate transport ATP-binding protein CmpD, at 484,608 to 485,477
GFF456
Position (kb) 483
484
485 Strain fitness (log2 ratio) -2
-1
0
1 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.780 kb on + strand, within GFF454 at 482.781 kb on - strand, within GFF454 at 482.781 kb on - strand, within GFF454 at 482.781 kb on - strand, within GFF454 at 482.781 kb on - strand, within GFF454 at 482.781 kb on - strand, within GFF454 at 482.783 kb on - strand, within GFF454 at 483.335 kb on + strand, within GFF454 at 483.336 kb on - strand, within GFF454 at 483.564 kb on - strand at 483.564 kb on - strand at 483.564 kb on - strand at 483.564 kb on - strand at 483.823 kb on - strand, within GFF455 at 484.195 kb on + strand, within GFF455 at 484.195 kb on + strand, within GFF455 at 484.196 kb on - strand, within GFF455 at 484.196 kb on - strand, within GFF455 at 484.750 kb on + strand, within GFF456 at 484.751 kb on - strand, within GFF456 at 484.790 kb on - strand, within GFF456 at 485.071 kb on + strand, within GFF456 at 485.072 kb on - strand, within GFF456 at 485.525 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 482,780 + GFF454 0.49 -0.2 482,780 + GFF454 0.49 -0.6 482,780 + GFF454 0.49 +0.4 482,780 + GFF454 0.49 +1.0 482,780 + GFF454 0.49 -0.9 482,780 + GFF454 0.49 -0.9 482,780 + GFF454 0.49 +1.3 482,780 + GFF454 0.49 +0.9 482,780 + GFF454 0.49 +0.3 482,780 + GFF454 0.49 +0.2 482,780 + GFF454 0.49 -1.9 482,781 - GFF454 0.49 +0.1 482,781 - GFF454 0.49 -1.9 482,781 - GFF454 0.49 +1.0 482,781 - GFF454 0.49 -0.9 482,781 - GFF454 0.49 +0.0 482,783 - GFF454 0.49 -1.5 483,335 + GFF454 0.89 -0.0 483,336 - GFF454 0.89 +0.3 483,564 - +0.3 483,564 - +0.3 483,564 - -0.4 483,564 - -0.4 483,823 - GFF455 0.13 +0.4 484,195 + GFF455 0.55 -0.1 484,195 + GFF455 0.55 -0.2 484,196 - GFF455 0.55 -0.3 484,196 - GFF455 0.55 -1.8 484,750 + GFF456 0.16 -0.0 484,751 - GFF456 0.16 -0.7 484,790 - GFF456 0.21 -1.1 485,071 + GFF456 0.53 +0.1 485,072 - GFF456 0.53 -0.2 485,525 + -0.9
Or see this region's nucleotide sequence