Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4409 and GFF4410 overlap by 1 nucleotides GFF4410 and GFF4411 are separated by 252 nucleotides
GFF4409 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 215,617 to 216,501
GFF4409
GFF4410 - Succinate--CoA ligase [ADP-forming] subunit beta, at 216,501 to 217,703
GFF4410
GFF4411 - Malate dehydrogenase, at 217,956 to 218,921
GFF4411
Position (kb) 216
217
218 Strain fitness (log2 ratio) -1
0
1 at 216.027 kb on - strand, within GFF4409 at 216.288 kb on - strand, within GFF4409 at 216.288 kb on - strand, within GFF4409 at 216.288 kb on - strand, within GFF4409 at 216.288 kb on - strand, within GFF4409 at 216.920 kb on - strand, within GFF4410 at 216.920 kb on - strand, within GFF4410 at 216.920 kb on - strand, within GFF4410 at 216.932 kb on - strand, within GFF4410 at 216.987 kb on - strand, within GFF4410 at 217.121 kb on - strand, within GFF4410 at 217.121 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.698 kb on - strand at 217.698 kb on - strand at 217.698 kb on - strand at 218.070 kb on - strand, within GFF4411 at 218.113 kb on + strand, within GFF4411 at 218.114 kb on - strand, within GFF4411 at 218.224 kb on + strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.366 kb on - strand, within GFF4411
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 216,027 - GFF4409 0.46 +0.3 216,288 - GFF4409 0.76 -0.4 216,288 - GFF4409 0.76 -0.5 216,288 - GFF4409 0.76 -1.6 216,288 - GFF4409 0.76 -0.7 216,920 - GFF4410 0.35 +0.0 216,920 - GFF4410 0.35 +0.3 216,920 - GFF4410 0.35 +0.6 216,932 - GFF4410 0.36 -0.7 216,987 - GFF4410 0.40 -0.1 217,121 - GFF4410 0.52 +1.5 217,121 - GFF4410 0.52 -1.4 217,349 - GFF4410 0.70 -1.5 217,349 - GFF4410 0.70 -0.8 217,349 - GFF4410 0.70 -0.2 217,349 - GFF4410 0.70 -0.2 217,698 - +0.8 217,698 - +0.5 217,698 - +1.2 218,070 - GFF4411 0.12 +0.8 218,113 + GFF4411 0.16 +0.3 218,114 - GFF4411 0.16 +0.3 218,224 + GFF4411 0.28 +1.0 218,225 - GFF4411 0.28 +0.5 218,225 - GFF4411 0.28 +1.1 218,225 - GFF4411 0.28 +0.7 218,366 - GFF4411 0.42 +0.5
Or see this region's nucleotide sequence