Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4385 and GFF4386 are separated by 124 nucleotides GFF4386 and GFF4387 overlap by 14 nucleotides
GFF4385 - hypothetical protein, at 184,097 to 185,233
GFF4385
GFF4386 - hypothetical protein, at 185,358 to 187,115
GFF4386
GFF4387 - Steroid C26-monooxygenase, at 187,102 to 188,370
GFF4387
Position (kb) 185
186
187
188 Strain fitness (log2 ratio) -1
0
1
2 at 184.495 kb on + strand, within GFF4385 at 184.495 kb on + strand, within GFF4385 at 184.496 kb on - strand, within GFF4385 at 184.496 kb on - strand, within GFF4385 at 184.595 kb on + strand, within GFF4385 at 185.156 kb on + strand at 185.284 kb on - strand at 185.381 kb on + strand at 185.545 kb on - strand, within GFF4386 at 185.847 kb on + strand, within GFF4386 at 186.105 kb on + strand, within GFF4386 at 186.132 kb on + strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.165 kb on + strand, within GFF4386 at 186.166 kb on - strand, within GFF4386 at 186.715 kb on - strand, within GFF4386 at 186.715 kb on - strand, within GFF4386 at 186.777 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.892 kb on - strand, within GFF4386 at 186.892 kb on - strand, within GFF4386 at 187.077 kb on + strand at 187.262 kb on - strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.349 kb on - strand, within GFF4387 at 187.402 kb on + strand, within GFF4387 at 187.403 kb on - strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.993 kb on + strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 188.059 kb on + strand, within GFF4387 at 188.059 kb on + strand, within GFF4387
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 184,495 + GFF4385 0.35 -1.4 184,495 + GFF4385 0.35 -1.2 184,496 - GFF4385 0.35 +1.1 184,496 - GFF4385 0.35 +0.5 184,595 + GFF4385 0.44 -0.6 185,156 + +0.3 185,284 - -0.3 185,381 + -0.2 185,545 - GFF4386 0.11 -1.0 185,847 + GFF4386 0.28 -0.6 186,105 + GFF4386 0.42 -0.1 186,132 + GFF4386 0.44 -0.4 186,133 - GFF4386 0.44 -1.0 186,133 - GFF4386 0.44 +1.1 186,133 - GFF4386 0.44 +0.3 186,165 + GFF4386 0.46 +0.7 186,166 - GFF4386 0.46 +0.3 186,715 - GFF4386 0.77 +0.6 186,715 - GFF4386 0.77 -1.0 186,777 + GFF4386 0.81 -0.2 186,849 + GFF4386 0.85 -0.5 186,849 + GFF4386 0.85 +1.1 186,849 + GFF4386 0.85 +1.2 186,850 - GFF4386 0.85 +1.0 186,850 - GFF4386 0.85 -1.0 186,850 - GFF4386 0.85 +0.1 186,891 + GFF4386 0.87 +0.1 186,891 + GFF4386 0.87 -0.0 186,891 + GFF4386 0.87 +0.0 186,892 - GFF4386 0.87 +0.2 186,892 - GFF4386 0.87 -1.2 187,077 + +0.3 187,262 - GFF4387 0.13 -0.2 187,348 + GFF4387 0.19 +0.3 187,348 + GFF4387 0.19 +2.1 187,348 + GFF4387 0.19 +0.0 187,348 + GFF4387 0.19 -0.8 187,349 - GFF4387 0.19 +0.2 187,402 + GFF4387 0.24 +0.1 187,403 - GFF4387 0.24 +0.0 187,612 + GFF4387 0.40 +0.3 187,612 + GFF4387 0.40 -0.7 187,612 + GFF4387 0.40 +0.5 187,613 - GFF4387 0.40 +1.8 187,613 - GFF4387 0.40 +1.2 187,993 + GFF4387 0.70 +1.0 187,994 - GFF4387 0.70 -0.7 187,994 - GFF4387 0.70 -1.5 188,059 + GFF4387 0.75 +0.2 188,059 + GFF4387 0.75 +0.0
Or see this region's nucleotide sequence