Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4249 and GFF4250 are separated by 103 nucleotides GFF4250 and GFF4251 are separated by 354 nucleotides
GFF4249 - putative enoyl-CoA hydratase echA6, at 20,035 to 20,817
GFF4249
GFF4250 - hypothetical protein, at 20,921 to 21,322
GFF4250
GFF4251 - Zinc-type alcohol dehydrogenase-like protein, at 21,677 to 22,693
GFF4251
Position (kb) 20
21
22 Strain fitness (log2 ratio) -1
0
1 at 19.952 kb on + strand at 19.952 kb on + strand at 19.953 kb on - strand at 20.281 kb on + strand, within GFF4249 at 20.281 kb on + strand, within GFF4249 at 20.281 kb on + strand, within GFF4249 at 20.282 kb on - strand, within GFF4249 at 20.282 kb on - strand, within GFF4249 at 20.404 kb on - strand, within GFF4249 at 20.458 kb on + strand, within GFF4249 at 20.557 kb on + strand, within GFF4249 at 20.557 kb on + strand, within GFF4249 at 20.558 kb on - strand, within GFF4249 at 20.558 kb on - strand, within GFF4249 at 20.558 kb on - strand, within GFF4249 at 20.948 kb on - strand at 20.969 kb on - strand, within GFF4250 at 20.969 kb on - strand, within GFF4250 at 21.310 kb on + strand at 21.310 kb on + strand at 21.311 kb on - strand at 21.311 kb on - strand at 21.311 kb on - strand at 21.443 kb on + strand at 21.567 kb on + strand at 21.569 kb on + strand at 21.569 kb on + strand at 21.569 kb on + strand at 21.696 kb on - strand at 22.296 kb on + strand, within GFF4251
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 19,952 + +0.8 19,952 + -0.8 19,953 - +0.6 20,281 + GFF4249 0.31 +0.5 20,281 + GFF4249 0.31 +0.9 20,281 + GFF4249 0.31 +0.3 20,282 - GFF4249 0.32 +0.3 20,282 - GFF4249 0.32 +0.7 20,404 - GFF4249 0.47 -0.9 20,458 + GFF4249 0.54 -0.2 20,557 + GFF4249 0.67 -0.2 20,557 + GFF4249 0.67 -1.1 20,558 - GFF4249 0.67 +0.1 20,558 - GFF4249 0.67 -0.7 20,558 - GFF4249 0.67 -0.1 20,948 - +0.3 20,969 - GFF4250 0.12 -0.2 20,969 - GFF4250 0.12 -0.7 21,310 + -0.9 21,310 + +0.8 21,311 - -0.5 21,311 - -0.4 21,311 - +0.3 21,443 + +0.1 21,567 + -0.0 21,569 + -0.7 21,569 + -0.0 21,569 + -0.7 21,696 - -0.6 22,296 + GFF4251 0.61 +0.0
Or see this region's nucleotide sequence