Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4204 and GFF4205 are separated by 523 nucleotides GFF4205 and GFF4206 are separated by 339 nucleotides
GFF4204 - Alpha-2-macroglobulin, at 224,212 to 229,542
GFF4204
GFF4205 - hypothetical protein, at 230,066 to 231,127
GFF4205
GFF4206 - Phosphate acetyltransferase, at 231,467 to 232,459
GFF4206
Position (kb) 230
231
232 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 229.170 kb on - strand at 229.283 kb on + strand at 229.610 kb on - strand at 229.723 kb on - strand at 229.773 kb on - strand at 229.773 kb on - strand at 230.296 kb on - strand, within GFF4205 at 230.335 kb on + strand, within GFF4205 at 230.336 kb on - strand, within GFF4205 at 230.604 kb on - strand, within GFF4205 at 230.604 kb on - strand, within GFF4205 at 230.657 kb on + strand, within GFF4205 at 230.657 kb on + strand, within GFF4205 at 230.657 kb on + strand, within GFF4205 at 230.658 kb on - strand, within GFF4205 at 230.658 kb on - strand, within GFF4205 at 230.660 kb on - strand, within GFF4205 at 230.696 kb on + strand, within GFF4205 at 230.696 kb on + strand, within GFF4205 at 230.712 kb on - strand, within GFF4205 at 230.918 kb on + strand, within GFF4205 at 230.918 kb on + strand, within GFF4205 at 230.919 kb on - strand, within GFF4205 at 230.919 kb on - strand, within GFF4205 at 230.920 kb on + strand, within GFF4205 at 230.921 kb on - strand, within GFF4205 at 230.921 kb on - strand, within GFF4205 at 230.991 kb on - strand, within GFF4205 at 231.014 kb on + strand, within GFF4205 at 231.015 kb on - strand, within GFF4205 at 231.047 kb on + strand at 231.048 kb on - strand at 231.264 kb on + strand at 231.527 kb on + strand at 231.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 229,170 - +4.1 229,283 + +3.7 229,610 - -0.0 229,723 - -0.9 229,773 - +0.1 229,773 - +1.0 230,296 - GFF4205 0.22 -0.4 230,335 + GFF4205 0.25 +0.3 230,336 - GFF4205 0.25 +0.6 230,604 - GFF4205 0.51 -1.5 230,604 - GFF4205 0.51 +0.6 230,657 + GFF4205 0.56 +1.1 230,657 + GFF4205 0.56 -2.3 230,657 + GFF4205 0.56 -0.6 230,658 - GFF4205 0.56 -0.7 230,658 - GFF4205 0.56 -0.4 230,660 - GFF4205 0.56 +0.2 230,696 + GFF4205 0.59 +0.6 230,696 + GFF4205 0.59 +0.4 230,712 - GFF4205 0.61 -0.8 230,918 + GFF4205 0.80 +0.1 230,918 + GFF4205 0.80 +0.9 230,919 - GFF4205 0.80 -0.9 230,919 - GFF4205 0.80 +1.6 230,920 + GFF4205 0.80 -1.1 230,921 - GFF4205 0.81 +0.4 230,921 - GFF4205 0.81 +1.4 230,991 - GFF4205 0.87 -0.7 231,014 + GFF4205 0.89 +0.6 231,015 - GFF4205 0.89 -0.3 231,047 + -0.8 231,048 - +0.4 231,264 + +0.3 231,527 + -0.2 231,528 - -0.9
Or see this region's nucleotide sequence