Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4187 and GFF4188 are separated by 3 nucleotides GFF4188 and GFF4189 are separated by 8 nucleotides GFF4189 and GFF4190 overlap by 1 nucleotides
GFF4187 - putative iron-sulfur-binding oxidoreductase FadF, at 204,707 to 206,869
GFF4187
GFF4188 - hypothetical protein, at 206,873 to 208,276
GFF4188
GFF4189 - Electron transfer flavoprotein subunit beta, at 208,285 to 209,079
GFF4189
GFF4190 - Electron transfer flavoprotein subunit alpha, at 209,079 to 210,050
GFF4190
Position (kb) 206
207
208
209 Strain fitness (log2 ratio) -2
-1
0
1
2 at 206.127 kb on - strand, within GFF4187 at 206.127 kb on - strand, within GFF4187 at 206.127 kb on - strand, within GFF4187 at 206.127 kb on - strand, within GFF4187 at 206.214 kb on - strand, within GFF4187 at 206.214 kb on - strand, within GFF4187 at 206.393 kb on + strand, within GFF4187 at 206.393 kb on + strand, within GFF4187 at 206.394 kb on - strand, within GFF4187 at 206.394 kb on - strand, within GFF4187 at 206.422 kb on + strand, within GFF4187 at 206.483 kb on + strand, within GFF4187 at 206.483 kb on + strand, within GFF4187 at 206.522 kb on + strand, within GFF4187 at 206.522 kb on + strand, within GFF4187 at 206.522 kb on + strand, within GFF4187 at 206.523 kb on - strand, within GFF4187 at 206.523 kb on - strand, within GFF4187 at 206.716 kb on + strand at 206.716 kb on + strand at 206.717 kb on - strand at 206.933 kb on + strand at 206.933 kb on + strand at 206.934 kb on - strand at 206.951 kb on + strand at 206.952 kb on - strand at 207.142 kb on - strand, within GFF4188 at 208.098 kb on - strand, within GFF4188 at 208.292 kb on + strand at 208.292 kb on + strand at 208.292 kb on + strand at 208.293 kb on - strand at 208.293 kb on - strand at 208.293 kb on - strand at 208.405 kb on + strand, within GFF4189 at 208.405 kb on + strand, within GFF4189 at 208.406 kb on - strand, within GFF4189 at 208.406 kb on - strand, within GFF4189 at 208.858 kb on + strand, within GFF4189
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 206,127 - GFF4187 0.66 -0.2 206,127 - GFF4187 0.66 -0.7 206,127 - GFF4187 0.66 +0.4 206,127 - GFF4187 0.66 -1.9 206,214 - GFF4187 0.70 -1.0 206,214 - GFF4187 0.70 +0.4 206,393 + GFF4187 0.78 -0.5 206,393 + GFF4187 0.78 -1.2 206,394 - GFF4187 0.78 +0.4 206,394 - GFF4187 0.78 -0.3 206,422 + GFF4187 0.79 +0.4 206,483 + GFF4187 0.82 -0.3 206,483 + GFF4187 0.82 -0.9 206,522 + GFF4187 0.84 +1.8 206,522 + GFF4187 0.84 -0.2 206,522 + GFF4187 0.84 -0.4 206,523 - GFF4187 0.84 +0.4 206,523 - GFF4187 0.84 -1.1 206,716 + -0.1 206,716 + +0.3 206,717 - +0.2 206,933 + +0.4 206,933 + -0.9 206,934 - +0.8 206,951 + +0.7 206,952 - -0.3 207,142 - GFF4188 0.19 -1.1 208,098 - GFF4188 0.87 -1.0 208,292 + +0.6 208,292 + +0.8 208,292 + +2.3 208,293 - -0.8 208,293 - +0.8 208,293 - +1.3 208,405 + GFF4189 0.15 +0.4 208,405 + GFF4189 0.15 -0.4 208,406 - GFF4189 0.15 -0.0 208,406 - GFF4189 0.15 -0.2 208,858 + GFF4189 0.72 -0.5
Or see this region's nucleotide sequence