Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4157 and GFF4158 are separated by 265 nucleotides GFF4158 and GFF4159 are separated by 87 nucleotides GFF4159 and GFF4160 are separated by 6 nucleotides
GFF4157 - Small heat shock protein IbpA, at 170,451 to 170,936
GFF4157
GFF4158 - hypothetical protein, at 171,202 to 171,714
GFF4158
GFF4159 - Lysophospholipase L2, at 171,802 to 172,743
GFF4159
GFF4160 - Histidinol-phosphatase, at 172,750 to 173,535
GFF4160
Position (kb) 171
172
173 Strain fitness (log2 ratio) -2
-1
0
1
2 at 170.824 kb on + strand, within GFF4157 at 170.824 kb on + strand, within GFF4157 at 170.825 kb on - strand, within GFF4157 at 170.825 kb on - strand, within GFF4157 at 170.930 kb on + strand at 170.930 kb on + strand at 170.930 kb on + strand at 170.941 kb on + strand at 170.941 kb on + strand at 170.942 kb on - strand at 170.942 kb on - strand at 170.942 kb on - strand at 170.974 kb on + strand at 170.975 kb on - strand at 171.494 kb on - strand, within GFF4158 at 171.811 kb on + strand at 171.967 kb on + strand, within GFF4159 at 171.968 kb on - strand, within GFF4159 at 172.495 kb on + strand, within GFF4159 at 172.496 kb on - strand, within GFF4159 at 172.523 kb on + strand, within GFF4159 at 172.722 kb on + strand at 172.723 kb on - strand at 172.723 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 170,824 + GFF4157 0.77 -0.1 170,824 + GFF4157 0.77 +0.9 170,825 - GFF4157 0.77 -0.7 170,825 - GFF4157 0.77 -0.4 170,930 + +0.9 170,930 + -0.6 170,930 + -0.2 170,941 + -1.9 170,941 + +0.2 170,942 - +0.6 170,942 - +0.4 170,942 - +0.1 170,974 + +0.4 170,975 - -0.2 171,494 - GFF4158 0.57 +0.5 171,811 + +2.5 171,967 + GFF4159 0.18 +0.5 171,968 - GFF4159 0.18 +0.8 172,495 + GFF4159 0.74 +0.9 172,496 - GFF4159 0.74 +1.2 172,523 + GFF4159 0.77 +1.2 172,722 + +1.6 172,723 - +1.3 172,723 - -0.4
Or see this region's nucleotide sequence