Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3692 and GFF3693 are separated by 49 nucleotides GFF3693 and GFF3694 are separated by 147 nucleotides GFF3694 and GFF3695 are separated by 98 nucleotides
GFF3692 - hypothetical protein, at 33,931 to 35,142
GFF3692
GFF3693 - Lactate utilization protein A, at 35,192 to 36,511
GFF3693
GFF3694 - Thiamine-phosphate synthase, at 36,659 to 37,294
GFF3694
GFF3695 - Malate synthase A, at 37,393 to 39,003
GFF3695
Position (kb) 35
36
37 Strain fitness (log2 ratio) -2
-1
0
1
2 at 34.206 kb on + strand, within GFF3692 at 34.891 kb on + strand, within GFF3692 at 34.892 kb on - strand, within GFF3692 at 35.087 kb on - strand at 35.303 kb on + strand at 35.303 kb on + strand at 35.303 kb on + strand at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.409 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 36.023 kb on + strand, within GFF3693 at 36.023 kb on + strand, within GFF3693 at 36.024 kb on - strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.053 kb on + strand, within GFF3693 at 36.162 kb on - strand, within GFF3693 at 36.290 kb on + strand, within GFF3693 at 36.290 kb on + strand, within GFF3693 at 36.290 kb on + strand, within GFF3693 at 36.291 kb on - strand, within GFF3693 at 36.556 kb on + strand at 36.556 kb on + strand at 36.557 kb on - strand at 36.557 kb on - strand at 36.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 34,206 + GFF3692 0.23 -0.2 34,891 + GFF3692 0.79 +0.2 34,892 - GFF3692 0.79 +0.4 35,087 - +0.5 35,303 + -0.7 35,303 + -0.1 35,303 + -1.2 35,348 + GFF3693 0.12 +2.6 35,348 + GFF3693 0.12 +0.5 35,348 + GFF3693 0.12 +0.4 35,348 + GFF3693 0.12 -1.8 35,349 - GFF3693 0.12 -0.0 35,349 - GFF3693 0.12 +0.7 35,349 - GFF3693 0.12 -0.3 35,349 - GFF3693 0.12 +1.0 35,409 + GFF3693 0.16 -1.4 35,465 + GFF3693 0.21 -1.1 35,465 + GFF3693 0.21 -0.9 35,465 + GFF3693 0.21 +0.7 36,023 + GFF3693 0.63 +0.1 36,023 + GFF3693 0.63 -0.3 36,024 - GFF3693 0.63 -0.7 36,029 + GFF3693 0.63 +0.1 36,029 + GFF3693 0.63 -0.1 36,029 + GFF3693 0.63 -0.6 36,029 + GFF3693 0.63 +0.5 36,030 - GFF3693 0.63 +1.0 36,030 - GFF3693 0.63 +0.3 36,030 - GFF3693 0.63 -0.2 36,053 + GFF3693 0.65 +0.0 36,162 - GFF3693 0.73 +0.7 36,290 + GFF3693 0.83 +0.5 36,290 + GFF3693 0.83 -0.2 36,290 + GFF3693 0.83 -0.9 36,291 - GFF3693 0.83 +0.9 36,556 + -1.2 36,556 + -1.5 36,557 - -2.1 36,557 - -1.6 36,557 - -0.3
Or see this region's nucleotide sequence