Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3623 and GFF3624 overlap by 4 nucleotides GFF3624 and GFF3625 are separated by 30 nucleotides GFF3625 and GFF3626 are separated by 43 nucleotides GFF3626 and GFF3627 are separated by 179 nucleotides
GFF3623 - Fe(3+) dicitrate transport system permease protein FecD, at 489,335 to 490,330
GFF3623
GFF3624 - Hemin import ATP-binding protein HmuV, at 490,327 to 490,644
GFF3624
GFF3625 - Fe(3+) dicitrate transport ATP-binding protein FecE, at 490,675 to 491,067
GFF3625
GFF3626 - hypothetical protein, at 491,111 to 491,827
GFF3626
GFF3627 - HTH-type transcriptional regulator GltC, at 492,007 to 492,921
GFF3627
Position (kb) 490
491
492 Strain fitness (log2 ratio) -2
-1
0
1 at 489.691 kb on - strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.846 kb on - strand, within GFF3623 at 489.846 kb on - strand, within GFF3623 at 489.882 kb on + strand, within GFF3623 at 489.882 kb on + strand, within GFF3623 at 489.883 kb on - strand, within GFF3623 at 489.883 kb on - strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.114 kb on - strand, within GFF3623 at 490.114 kb on - strand, within GFF3623 at 490.507 kb on + strand, within GFF3624 at 490.564 kb on + strand, within GFF3624 at 490.564 kb on + strand, within GFF3624 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.720 kb on - strand, within GFF3625 at 490.957 kb on - strand, within GFF3625 at 491.146 kb on + strand at 491.260 kb on - strand, within GFF3626 at 491.318 kb on + strand, within GFF3626 at 491.318 kb on + strand, within GFF3626 at 491.417 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.702 kb on - strand, within GFF3626 at 491.821 kb on + strand at 491.821 kb on + strand at 491.822 kb on - strand at 491.822 kb on - strand at 491.822 kb on - strand at 491.822 kb on - strand at 491.844 kb on + strand at 491.844 kb on + strand at 491.844 kb on + strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.845 kb on - strand at 491.888 kb on + strand at 491.902 kb on + strand at 491.927 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 489,691 - GFF3623 0.36 -0.1 489,845 + GFF3623 0.51 -0.4 489,845 + GFF3623 0.51 +0.1 489,845 + GFF3623 0.51 +0.7 489,846 - GFF3623 0.51 -0.9 489,846 - GFF3623 0.51 +0.1 489,882 + GFF3623 0.55 -0.1 489,882 + GFF3623 0.55 -0.6 489,883 - GFF3623 0.55 +1.6 489,883 - GFF3623 0.55 +0.1 489,936 + GFF3623 0.60 +0.2 489,936 + GFF3623 0.60 -0.6 489,936 + GFF3623 0.60 -1.7 489,936 + GFF3623 0.60 -0.4 489,937 - GFF3623 0.60 +0.1 489,937 - GFF3623 0.60 -0.2 489,937 - GFF3623 0.60 +0.1 489,937 - GFF3623 0.60 -0.0 490,113 + GFF3623 0.78 +0.2 490,113 + GFF3623 0.78 +0.4 490,113 + GFF3623 0.78 +1.4 490,114 - GFF3623 0.78 -1.4 490,114 - GFF3623 0.78 -1.4 490,507 + GFF3624 0.57 -0.4 490,564 + GFF3624 0.75 -0.5 490,564 + GFF3624 0.75 +0.0 490,719 + GFF3625 0.11 -0.9 490,719 + GFF3625 0.11 +1.4 490,719 + GFF3625 0.11 -0.9 490,719 + GFF3625 0.11 -1.1 490,719 + GFF3625 0.11 +0.8 490,719 + GFF3625 0.11 +0.1 490,719 + GFF3625 0.11 -0.9 490,720 - GFF3625 0.11 -0.5 490,957 - GFF3625 0.72 -1.4 491,146 + +0.4 491,260 - GFF3626 0.21 +0.8 491,318 + GFF3626 0.29 +0.2 491,318 + GFF3626 0.29 -0.1 491,417 + GFF3626 0.43 -2.5 491,511 + GFF3626 0.56 -2.4 491,511 + GFF3626 0.56 -1.0 491,511 + GFF3626 0.56 +0.1 491,512 - GFF3626 0.56 -0.4 491,512 - GFF3626 0.56 +0.2 491,512 - GFF3626 0.56 +0.5 491,512 - GFF3626 0.56 +1.4 491,512 - GFF3626 0.56 +0.2 491,512 - GFF3626 0.56 -0.4 491,512 - GFF3626 0.56 +0.2 491,702 - GFF3626 0.82 -2.5 491,821 + +0.1 491,821 + -0.6 491,822 - +0.1 491,822 - +1.1 491,822 - +0.4 491,822 - +0.6 491,844 + +0.1 491,844 + -0.2 491,844 + +0.1 491,845 - +0.4 491,845 - +0.6 491,845 - -1.0 491,845 - -0.1 491,845 - +1.4 491,845 - +0.2 491,845 - +1.7 491,888 + +0.3 491,902 + +0.4 491,927 + -1.0
Or see this region's nucleotide sequence