Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3251 and GFF3252 are separated by 407 nucleotides GFF3252 and GFF3253 are separated by 346 nucleotides
GFF3251 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase, at 81,181 to 82,662
GFF3251
GFF3252 - hypothetical protein, at 83,070 to 83,543
GFF3252
GFF3253 - putative signaling protein, at 83,890 to 85,323
GFF3253
Position (kb) 83
84 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 82.247 kb on + strand, within GFF3251 at 82.316 kb on + strand, within GFF3251 at 82.316 kb on + strand, within GFF3251 at 82.316 kb on + strand, within GFF3251 at 82.316 kb on + strand, within GFF3251 at 82.316 kb on + strand, within GFF3251 at 82.317 kb on - strand, within GFF3251 at 82.317 kb on - strand, within GFF3251 at 82.317 kb on - strand, within GFF3251 at 82.317 kb on - strand, within GFF3251 at 82.317 kb on - strand, within GFF3251 at 82.352 kb on + strand, within GFF3251 at 82.352 kb on + strand, within GFF3251 at 82.352 kb on + strand, within GFF3251 at 82.353 kb on - strand, within GFF3251 at 82.463 kb on + strand, within GFF3251 at 82.463 kb on + strand, within GFF3251 at 82.463 kb on + strand, within GFF3251 at 82.463 kb on + strand, within GFF3251 at 82.464 kb on - strand, within GFF3251 at 82.464 kb on - strand, within GFF3251 at 82.464 kb on - strand, within GFF3251 at 82.464 kb on - strand, within GFF3251 at 82.517 kb on + strand at 82.517 kb on + strand at 82.518 kb on - strand at 82.518 kb on - strand at 82.518 kb on - strand at 82.695 kb on - strand at 82.814 kb on - strand at 83.383 kb on - strand, within GFF3252 at 83.383 kb on - strand, within GFF3252 at 83.383 kb on - strand, within GFF3252 at 83.429 kb on + strand, within GFF3252 at 83.429 kb on + strand, within GFF3252 at 83.610 kb on + strand at 83.610 kb on + strand at 83.682 kb on + strand at 83.685 kb on - strand at 83.692 kb on + strand at 83.705 kb on - strand at 83.705 kb on - strand at 83.705 kb on - strand at 83.718 kb on - strand at 83.748 kb on + strand at 83.749 kb on - strand at 83.766 kb on - strand at 83.770 kb on - strand at 83.961 kb on + strand at 83.962 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 82,247 + GFF3251 0.72 +0.9 82,316 + GFF3251 0.77 -2.1 82,316 + GFF3251 0.77 -0.2 82,316 + GFF3251 0.77 -0.3 82,316 + GFF3251 0.77 +0.2 82,316 + GFF3251 0.77 +0.8 82,317 - GFF3251 0.77 -0.1 82,317 - GFF3251 0.77 +0.4 82,317 - GFF3251 0.77 +0.8 82,317 - GFF3251 0.77 -0.3 82,317 - GFF3251 0.77 -1.3 82,352 + GFF3251 0.79 +0.7 82,352 + GFF3251 0.79 +0.3 82,352 + GFF3251 0.79 +0.2 82,353 - GFF3251 0.79 +2.8 82,463 + GFF3251 0.87 +1.2 82,463 + GFF3251 0.87 +1.1 82,463 + GFF3251 0.87 -0.3 82,463 + GFF3251 0.87 +1.8 82,464 - GFF3251 0.87 -0.1 82,464 - GFF3251 0.87 -0.4 82,464 - GFF3251 0.87 +0.5 82,464 - GFF3251 0.87 -1.1 82,517 + -0.2 82,517 + -0.2 82,518 - +0.6 82,518 - -0.3 82,518 - +0.5 82,695 - +0.7 82,814 - +0.3 83,383 - GFF3252 0.66 -0.3 83,383 - GFF3252 0.66 -1.7 83,383 - GFF3252 0.66 +0.7 83,429 + GFF3252 0.76 -1.3 83,429 + GFF3252 0.76 -2.4 83,610 + -0.2 83,610 + +0.1 83,682 + +0.6 83,685 - -0.8 83,692 + +0.6 83,705 - -0.4 83,705 - -1.7 83,705 - +0.9 83,718 - +0.1 83,748 + +0.3 83,749 - +0.4 83,766 - +1.1 83,770 - +0.0 83,961 + -0.7 83,962 - -0.8
Or see this region's nucleotide sequence