Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF31 and GFF32 are separated by 63 nucleotides GFF32 and GFF33 are separated by 136 nucleotides
GFF31 - Long-chain-fatty-acid--CoA ligase, at 36,894 to 38,456
GFF31
GFF32 - Acetolactate synthase large subunit IlvG, at 38,520 to 40,232
GFF32
GFF33 - Beta-ketothiolase BktB, at 40,369 to 41,553
GFF33
Position (kb) 38
39
40
41 Strain fitness (log2 ratio) -2
-1
0
1 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.532 kb on + strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.533 kb on - strand, within GFF31 at 37.576 kb on - strand, within GFF31 at 37.576 kb on - strand, within GFF31 at 37.600 kb on - strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.686 kb on + strand, within GFF31 at 37.687 kb on - strand, within GFF31 at 37.729 kb on - strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.109 kb on + strand, within GFF31 at 38.110 kb on - strand, within GFF31 at 38.209 kb on + strand, within GFF31 at 38.209 kb on + strand, within GFF31 at 38.210 kb on - strand, within GFF31 at 38.210 kb on - strand, within GFF31 at 38.344 kb on - strand at 38.475 kb on + strand at 39.228 kb on + strand, within GFF32 at 39.482 kb on + strand, within GFF32 at 40.280 kb on + strand at 40.301 kb on + strand at 40.301 kb on + strand at 40.325 kb on - strand at 40.407 kb on + strand at 40.567 kb on + strand, within GFF33 at 40.567 kb on + strand, within GFF33 at 40.567 kb on + strand, within GFF33 at 40.567 kb on + strand, within GFF33 at 40.567 kb on + strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.568 kb on - strand, within GFF33 at 40.744 kb on + strand, within GFF33 at 40.745 kb on - strand, within GFF33 at 40.955 kb on - strand, within GFF33 at 40.955 kb on - strand, within GFF33
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 37,532 + GFF31 0.41 +0.1 37,532 + GFF31 0.41 -1.6 37,532 + GFF31 0.41 -0.6 37,532 + GFF31 0.41 +0.1 37,532 + GFF31 0.41 -0.8 37,532 + GFF31 0.41 -0.7 37,532 + GFF31 0.41 +1.1 37,533 - GFF31 0.41 -0.5 37,533 - GFF31 0.41 +0.4 37,533 - GFF31 0.41 -0.4 37,533 - GFF31 0.41 +0.8 37,533 - GFF31 0.41 +0.1 37,533 - GFF31 0.41 +0.2 37,533 - GFF31 0.41 -0.5 37,533 - GFF31 0.41 -0.3 37,533 - GFF31 0.41 -1.0 37,576 - GFF31 0.44 -0.1 37,576 - GFF31 0.44 +0.4 37,600 - GFF31 0.45 -0.1 37,686 + GFF31 0.51 -0.0 37,686 + GFF31 0.51 -0.5 37,686 + GFF31 0.51 -0.5 37,687 - GFF31 0.51 -0.5 37,729 - GFF31 0.53 +0.1 38,109 + GFF31 0.78 -0.2 38,109 + GFF31 0.78 +0.5 38,109 + GFF31 0.78 -0.1 38,110 - GFF31 0.78 -0.5 38,209 + GFF31 0.84 -0.7 38,209 + GFF31 0.84 +0.5 38,210 - GFF31 0.84 -0.5 38,210 - GFF31 0.84 -0.7 38,344 - +0.5 38,475 + +0.5 39,228 + GFF32 0.41 -0.2 39,482 + GFF32 0.56 -0.7 40,280 + +0.0 40,301 + -0.9 40,301 + -2.4 40,325 - -0.6 40,407 + +0.1 40,567 + GFF33 0.17 -0.8 40,567 + GFF33 0.17 -0.2 40,567 + GFF33 0.17 +0.0 40,567 + GFF33 0.17 +0.5 40,567 + GFF33 0.17 +0.1 40,568 - GFF33 0.17 -0.2 40,568 - GFF33 0.17 +0.8 40,568 - GFF33 0.17 +0.7 40,568 - GFF33 0.17 +0.0 40,568 - GFF33 0.17 -0.7 40,568 - GFF33 0.17 +0.5 40,568 - GFF33 0.17 -0.1 40,744 + GFF33 0.32 +0.1 40,745 - GFF33 0.32 +0.6 40,955 - GFF33 0.49 -0.7 40,955 - GFF33 0.49 -0.9
Or see this region's nucleotide sequence