Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3161 and GFF3162 are separated by 261 nucleotides GFF3162 and GFF3163 are separated by 68 nucleotides GFF3163 and GFF3164 are separated by 380 nucleotides
GFF3161 - Propionyl-CoA carboxylase beta chain, at 898,956 to 900,488
GFF3161
GFF3162 - Propionyl-CoA carboxylase regulator, at 900,750 to 902,174
GFF3162
GFF3163 - hypothetical protein, at 902,243 to 902,431
GFF3163
GFF3164 - hypothetical protein, at 902,812 to 903,750
GFF3164
Position (kb) 900
901
902
903 Strain fitness (log2 ratio) -1
0
1
2 at 899.833 kb on + strand, within GFF3161 at 899.837 kb on + strand, within GFF3161 at 899.837 kb on + strand, within GFF3161 at 899.837 kb on + strand, within GFF3161 at 899.923 kb on + strand, within GFF3161 at 899.923 kb on + strand, within GFF3161 at 899.923 kb on + strand, within GFF3161 at 899.924 kb on - strand, within GFF3161 at 899.924 kb on - strand, within GFF3161 at 900.079 kb on - strand, within GFF3161 at 900.079 kb on - strand, within GFF3161 at 900.337 kb on + strand at 900.340 kb on + strand at 900.518 kb on - strand at 900.852 kb on + strand at 900.852 kb on + strand at 900.853 kb on - strand at 900.853 kb on - strand at 900.909 kb on - strand, within GFF3162 at 901.270 kb on + strand, within GFF3162 at 901.278 kb on - strand, within GFF3162 at 901.567 kb on - strand, within GFF3162 at 901.567 kb on - strand, within GFF3162 at 901.567 kb on - strand, within GFF3162 at 901.732 kb on - strand, within GFF3162 at 902.010 kb on + strand, within GFF3162 at 902.345 kb on - strand, within GFF3163 at 902.520 kb on + strand at 902.529 kb on + strand at 902.529 kb on + strand at 902.531 kb on + strand at 902.532 kb on - strand at 902.539 kb on - strand at 902.658 kb on + strand at 902.658 kb on + strand at 902.659 kb on - strand at 902.659 kb on - strand at 902.703 kb on + strand at 902.703 kb on + strand at 902.704 kb on - strand at 902.704 kb on - strand at 902.705 kb on + strand at 902.706 kb on - strand at 902.779 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 899,833 + GFF3161 0.57 -0.9 899,837 + GFF3161 0.57 +0.2 899,837 + GFF3161 0.57 +0.6 899,837 + GFF3161 0.57 -0.0 899,923 + GFF3161 0.63 +1.0 899,923 + GFF3161 0.63 -0.5 899,923 + GFF3161 0.63 +0.3 899,924 - GFF3161 0.63 +1.4 899,924 - GFF3161 0.63 +1.7 900,079 - GFF3161 0.73 +1.3 900,079 - GFF3161 0.73 -1.2 900,337 + +0.7 900,340 + +0.7 900,518 - -0.6 900,852 + +0.7 900,852 + +0.4 900,853 - +0.8 900,853 - -1.0 900,909 - GFF3162 0.11 -0.4 901,270 + GFF3162 0.36 -0.9 901,278 - GFF3162 0.37 +0.2 901,567 - GFF3162 0.57 +0.5 901,567 - GFF3162 0.57 -0.4 901,567 - GFF3162 0.57 +0.2 901,732 - GFF3162 0.69 -0.3 902,010 + GFF3162 0.88 -0.3 902,345 - GFF3163 0.54 +1.0 902,520 + +0.5 902,529 + -0.2 902,529 + -0.7 902,531 + +0.2 902,532 - +0.8 902,539 - +0.5 902,658 + -0.2 902,658 + -0.1 902,659 - +2.1 902,659 - +0.1 902,703 + -0.0 902,703 + -0.3 902,704 - +2.0 902,704 - +0.0 902,705 + +0.2 902,706 - +0.2 902,779 - -0.9
Or see this region's nucleotide sequence