Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3022 and GFF3023 overlap by 1 nucleotides GFF3023 and GFF3024 overlap by 4 nucleotides GFF3024 and GFF3025 overlap by 1 nucleotides GFF3025 and GFF3026 overlap by 38 nucleotides
GFF3022 - hypothetical protein, at 746,633 to 747,607
GFF3022
GFF3023 - hypothetical protein, at 747,607 to 748,185
GFF3023
GFF3024 - hypothetical protein, at 748,182 to 749,225
GFF3024
GFF3025 - hypothetical protein, at 749,225 to 750,187
GFF3025
GFF3026 - hypothetical protein, at 750,150 to 751,010
GFF3026
Position (kb) 748
749
750 Strain fitness (log2 ratio) -2
-1
0
1
2 at 747.228 kb on + strand, within GFF3022 at 747.234 kb on + strand, within GFF3022 at 747.234 kb on + strand, within GFF3022 at 747.234 kb on + strand, within GFF3022 at 747.234 kb on + strand, within GFF3022 at 747.235 kb on - strand, within GFF3022 at 747.235 kb on - strand, within GFF3022 at 747.333 kb on + strand, within GFF3022 at 747.334 kb on - strand, within GFF3022 at 747.456 kb on + strand, within GFF3022 at 747.497 kb on + strand, within GFF3022 at 747.498 kb on - strand, within GFF3022 at 747.498 kb on - strand, within GFF3022 at 747.508 kb on - strand, within GFF3022 at 747.738 kb on - strand, within GFF3023 at 747.881 kb on + strand, within GFF3023 at 748.345 kb on + strand, within GFF3024 at 748.558 kb on + strand, within GFF3024 at 749.375 kb on + strand, within GFF3025 at 749.376 kb on - strand, within GFF3025 at 749.376 kb on - strand, within GFF3025 at 749.376 kb on - strand, within GFF3025 at 749.673 kb on + strand, within GFF3025 at 749.674 kb on - strand, within GFF3025 at 749.856 kb on + strand, within GFF3025 at 749.856 kb on + strand, within GFF3025 at 749.856 kb on + strand, within GFF3025 at 749.868 kb on + strand, within GFF3025 at 749.868 kb on + strand, within GFF3025 at 749.949 kb on + strand, within GFF3025 at 749.950 kb on - strand, within GFF3025 at 749.950 kb on - strand, within GFF3025 at 749.954 kb on - strand, within GFF3025 at 750.048 kb on + strand, within GFF3025 at 750.070 kb on - strand, within GFF3025 at 750.152 kb on - strand at 750.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 747,228 + GFF3022 0.61 -0.3 747,234 + GFF3022 0.62 -0.4 747,234 + GFF3022 0.62 +0.2 747,234 + GFF3022 0.62 -0.3 747,234 + GFF3022 0.62 -0.5 747,235 - GFF3022 0.62 -0.9 747,235 - GFF3022 0.62 -1.2 747,333 + GFF3022 0.72 -0.0 747,334 - GFF3022 0.72 -0.3 747,456 + GFF3022 0.84 +0.1 747,497 + GFF3022 0.89 +0.7 747,498 - GFF3022 0.89 +0.4 747,498 - GFF3022 0.89 -0.7 747,508 - GFF3022 0.90 -0.4 747,738 - GFF3023 0.23 +0.5 747,881 + GFF3023 0.47 +1.1 748,345 + GFF3024 0.16 +2.0 748,558 + GFF3024 0.36 -0.5 749,375 + GFF3025 0.16 +0.5 749,376 - GFF3025 0.16 +0.3 749,376 - GFF3025 0.16 +0.6 749,376 - GFF3025 0.16 -0.4 749,673 + GFF3025 0.47 +0.6 749,674 - GFF3025 0.47 -0.6 749,856 + GFF3025 0.66 +0.2 749,856 + GFF3025 0.66 +0.6 749,856 + GFF3025 0.66 +1.0 749,868 + GFF3025 0.67 -0.8 749,868 + GFF3025 0.67 -1.6 749,949 + GFF3025 0.75 +1.6 749,950 - GFF3025 0.75 -2.4 749,950 - GFF3025 0.75 +0.6 749,954 - GFF3025 0.76 +0.4 750,048 + GFF3025 0.85 +0.0 750,070 - GFF3025 0.88 -0.2 750,152 - -0.7 750,218 - +1.5
Or see this region's nucleotide sequence