Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3018 and GFF3019 are separated by 64 nucleotides GFF3019 and GFF3020 are separated by 135 nucleotides
GFF3018 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 742,644 to 744,164
GFF3018
GFF3019 - hypothetical protein, at 744,229 to 745,023
GFF3019
GFF3020 - Virginiamycin B lyase, at 745,159 to 746,091
GFF3020
Position (kb) 744
745
746 Strain fitness (log2 ratio) -1
0
1 at 743.451 kb on + strand, within GFF3018 at 743.451 kb on + strand, within GFF3018 at 743.451 kb on + strand, within GFF3018 at 743.452 kb on - strand, within GFF3018 at 743.475 kb on + strand, within GFF3018 at 743.475 kb on + strand, within GFF3018 at 743.553 kb on + strand, within GFF3018 at 743.553 kb on + strand, within GFF3018 at 743.554 kb on - strand, within GFF3018 at 743.554 kb on - strand, within GFF3018 at 743.554 kb on - strand, within GFF3018 at 743.554 kb on - strand, within GFF3018 at 744.130 kb on - strand at 744.130 kb on - strand at 744.185 kb on + strand at 744.186 kb on - strand at 744.308 kb on + strand at 744.379 kb on + strand, within GFF3019 at 744.710 kb on + strand, within GFF3019 at 744.799 kb on - strand, within GFF3019 at 744.813 kb on - strand, within GFF3019 at 745.109 kb on + strand at 745.109 kb on + strand at 745.112 kb on + strand at 745.271 kb on + strand, within GFF3020 at 745.357 kb on - strand, within GFF3020 at 745.433 kb on + strand, within GFF3020 at 745.434 kb on - strand, within GFF3020 at 745.598 kb on - strand, within GFF3020 at 745.770 kb on - strand, within GFF3020
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 743,451 + GFF3018 0.53 -0.6 743,451 + GFF3018 0.53 -0.1 743,451 + GFF3018 0.53 -0.2 743,452 - GFF3018 0.53 -0.1 743,475 + GFF3018 0.55 -0.1 743,475 + GFF3018 0.55 +0.4 743,553 + GFF3018 0.60 -1.4 743,553 + GFF3018 0.60 +0.6 743,554 - GFF3018 0.60 +1.1 743,554 - GFF3018 0.60 -1.4 743,554 - GFF3018 0.60 -0.2 743,554 - GFF3018 0.60 -1.4 744,130 - +0.0 744,130 - -0.1 744,185 + -0.0 744,186 - -0.0 744,308 + -0.4 744,379 + GFF3019 0.19 -1.7 744,710 + GFF3019 0.61 -1.6 744,799 - GFF3019 0.72 -1.0 744,813 - GFF3019 0.73 +0.1 745,109 + -1.2 745,109 + -0.5 745,112 + -0.3 745,271 + GFF3020 0.12 -0.4 745,357 - GFF3020 0.21 -0.1 745,433 + GFF3020 0.29 -0.5 745,434 - GFF3020 0.29 +1.1 745,598 - GFF3020 0.47 -0.2 745,770 - GFF3020 0.65 -0.4
Or see this region's nucleotide sequence