Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2968 and GFF2969 are separated by 1 nucleotides GFF2969 and GFF2970 are separated by 273 nucleotides
GFF2968 - hypothetical protein, at 693,128 to 694,327
GFF2968
GFF2969 - High-affinity branched-chain amino acid transport system permease protein LivH, at 694,329 to 695,249
GFF2969
GFF2970 - Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein, at 695,523 to 696,716
GFF2970
Position (kb) 694
695
696 Strain fitness (log2 ratio) -1
0
1 at 693.409 kb on - strand, within GFF2968 at 693.409 kb on - strand, within GFF2968 at 693.409 kb on - strand, within GFF2968 at 693.615 kb on + strand, within GFF2968 at 693.615 kb on + strand, within GFF2968 at 693.616 kb on - strand, within GFF2968 at 693.616 kb on - strand, within GFF2968 at 693.617 kb on + strand, within GFF2968 at 693.630 kb on + strand, within GFF2968 at 693.630 kb on + strand, within GFF2968 at 693.630 kb on + strand, within GFF2968 at 693.630 kb on + strand, within GFF2968 at 693.631 kb on - strand, within GFF2968 at 693.631 kb on - strand, within GFF2968 at 693.777 kb on + strand, within GFF2968 at 693.777 kb on + strand, within GFF2968 at 693.877 kb on + strand, within GFF2968 at 693.877 kb on + strand, within GFF2968 at 693.877 kb on + strand, within GFF2968 at 693.878 kb on - strand, within GFF2968 at 693.900 kb on + strand, within GFF2968 at 693.901 kb on - strand, within GFF2968 at 693.901 kb on - strand, within GFF2968 at 693.901 kb on - strand, within GFF2968 at 693.901 kb on - strand, within GFF2968 at 694.023 kb on + strand, within GFF2968 at 694.024 kb on - strand, within GFF2968 at 694.024 kb on - strand, within GFF2968 at 694.024 kb on - strand, within GFF2968 at 694.024 kb on - strand, within GFF2968 at 694.024 kb on - strand, within GFF2968 at 694.260 kb on - strand at 694.288 kb on + strand at 694.420 kb on + strand at 694.421 kb on - strand, within GFF2969 at 694.421 kb on - strand, within GFF2969 at 694.421 kb on - strand, within GFF2969 at 694.585 kb on + strand, within GFF2969 at 694.585 kb on + strand, within GFF2969 at 694.585 kb on + strand, within GFF2969 at 694.585 kb on + strand, within GFF2969 at 695.137 kb on + strand, within GFF2969 at 695.191 kb on + strand at 695.192 kb on - strand at 695.192 kb on - strand at 695.224 kb on + strand at 695.225 kb on - strand at 695.569 kb on + strand at 695.587 kb on + strand at 695.588 kb on - strand at 695.588 kb on - strand at 695.588 kb on - strand at 695.614 kb on + strand at 695.615 kb on - strand at 695.615 kb on - strand at 695.615 kb on - strand at 695.615 kb on - strand at 695.680 kb on + strand, within GFF2970 at 695.681 kb on - strand, within GFF2970 at 695.821 kb on + strand, within GFF2970 at 695.852 kb on - strand, within GFF2970 at 695.852 kb on - strand, within GFF2970 at 695.852 kb on - strand, within GFF2970 at 695.852 kb on - strand, within GFF2970 at 696.148 kb on + strand, within GFF2970 at 696.149 kb on - strand, within GFF2970
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 693,409 - GFF2968 0.23 -0.3 693,409 - GFF2968 0.23 +0.1 693,409 - GFF2968 0.23 -0.0 693,615 + GFF2968 0.41 -0.1 693,615 + GFF2968 0.41 +0.0 693,616 - GFF2968 0.41 -0.1 693,616 - GFF2968 0.41 +0.1 693,617 + GFF2968 0.41 -0.9 693,630 + GFF2968 0.42 +1.1 693,630 + GFF2968 0.42 -0.9 693,630 + GFF2968 0.42 -0.2 693,630 + GFF2968 0.42 +0.7 693,631 - GFF2968 0.42 -0.2 693,631 - GFF2968 0.42 +0.0 693,777 + GFF2968 0.54 -0.4 693,777 + GFF2968 0.54 -0.1 693,877 + GFF2968 0.62 +1.5 693,877 + GFF2968 0.62 +0.6 693,877 + GFF2968 0.62 -0.3 693,878 - GFF2968 0.62 -0.2 693,900 + GFF2968 0.64 +0.9 693,901 - GFF2968 0.64 -0.1 693,901 - GFF2968 0.64 +0.9 693,901 - GFF2968 0.64 +0.1 693,901 - GFF2968 0.64 -0.0 694,023 + GFF2968 0.75 -0.7 694,024 - GFF2968 0.75 +0.6 694,024 - GFF2968 0.75 +1.1 694,024 - GFF2968 0.75 +0.2 694,024 - GFF2968 0.75 +0.2 694,024 - GFF2968 0.75 -0.1 694,260 - +0.2 694,288 + -0.3 694,420 + +0.4 694,421 - GFF2969 0.10 +0.7 694,421 - GFF2969 0.10 -0.5 694,421 - GFF2969 0.10 +1.0 694,585 + GFF2969 0.28 -0.1 694,585 + GFF2969 0.28 +1.2 694,585 + GFF2969 0.28 -0.5 694,585 + GFF2969 0.28 -1.2 695,137 + GFF2969 0.88 -0.5 695,191 + -0.4 695,192 - +0.5 695,192 - -0.4 695,224 + -1.6 695,225 - -0.3 695,569 + -0.1 695,587 + -1.6 695,588 - +0.3 695,588 - -1.3 695,588 - +0.8 695,614 + -0.3 695,615 - -1.6 695,615 - -0.0 695,615 - -0.2 695,615 - +0.7 695,680 + GFF2970 0.13 -0.4 695,681 - GFF2970 0.13 +0.3 695,821 + GFF2970 0.25 -0.4 695,852 - GFF2970 0.28 +1.7 695,852 - GFF2970 0.28 -0.6 695,852 - GFF2970 0.28 +0.7 695,852 - GFF2970 0.28 +0.3 696,148 + GFF2970 0.52 +0.5 696,149 - GFF2970 0.52 +0.6
Or see this region's nucleotide sequence