Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2808 and GFF2809 are separated by 160 nucleotides GFF2809 and GFF2810 are separated by 7 nucleotides GFF2810 and GFF2811 are separated by 9 nucleotides
GFF2808 - hypothetical protein, at 515,172 to 516,374
GFF2808
GFF2809 - hypothetical protein, at 516,535 to 516,981
GFF2809
GFF2810 - hypothetical protein, at 516,989 to 517,423
GFF2810
GFF2811 - Electron transfer flavoprotein-ubiquinone oxidoreductase, at 517,433 to 519,085
GFF2811
Position (kb) 516
517 Strain fitness (log2 ratio) -2
-1
0
1
2 at 515.749 kb on + strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.761 kb on + strand, within GFF2808 at 515.832 kb on - strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 516.355 kb on - strand at 516.365 kb on - strand at 516.365 kb on - strand at 516.401 kb on - strand at 516.401 kb on - strand at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.605 kb on - strand, within GFF2809 at 516.658 kb on + strand, within GFF2809 at 516.659 kb on - strand, within GFF2809 at 516.790 kb on + strand, within GFF2809 at 516.837 kb on - strand, within GFF2809 at 517.352 kb on - strand, within GFF2810 at 517.352 kb on - strand, within GFF2810 at 517.353 kb on + strand, within GFF2810 at 517.354 kb on - strand, within GFF2810 at 517.354 kb on - strand, within GFF2810 at 517.446 kb on + strand at 517.447 kb on - strand at 517.588 kb on - strand at 517.588 kb on - strand at 517.605 kb on + strand, within GFF2811 at 517.606 kb on - strand, within GFF2811 at 517.908 kb on + strand, within GFF2811
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 515,749 + GFF2808 0.48 -0.1 515,750 - GFF2808 0.48 -0.2 515,750 - GFF2808 0.48 +0.4 515,750 - GFF2808 0.48 -1.3 515,750 - GFF2808 0.48 +0.1 515,761 + GFF2808 0.49 -1.1 515,832 - GFF2808 0.55 -0.9 515,944 + GFF2808 0.64 +1.4 515,944 + GFF2808 0.64 +1.4 515,944 + GFF2808 0.64 +0.3 516,355 - +0.1 516,365 - +0.4 516,365 - +0.7 516,401 - -0.9 516,401 - -1.0 516,604 + GFF2809 0.15 -2.7 516,604 + GFF2809 0.15 +0.4 516,604 + GFF2809 0.15 +0.7 516,604 + GFF2809 0.15 -0.9 516,605 - GFF2809 0.16 -1.2 516,658 + GFF2809 0.28 +1.0 516,659 - GFF2809 0.28 +1.9 516,790 + GFF2809 0.57 +0.7 516,837 - GFF2809 0.68 +0.7 517,352 - GFF2810 0.83 -0.2 517,352 - GFF2810 0.83 +0.5 517,353 + GFF2810 0.84 -1.1 517,354 - GFF2810 0.84 +0.6 517,354 - GFF2810 0.84 -1.3 517,446 + -1.1 517,447 - +0.4 517,588 - +0.3 517,588 - -0.1 517,605 + GFF2811 0.10 +0.2 517,606 - GFF2811 0.10 -0.9 517,908 + GFF2811 0.29 -0.4
Or see this region's nucleotide sequence