Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2751 and GFF2752 are separated by 13 nucleotides GFF2752 and GFF2753 are separated by 116 nucleotides
GFF2751 - Iron-uptake system permease protein FeuC, at 452,708 to 453,757
GFF2751
GFF2752 - putative siderophore-binding lipoprotein YfiY, at 453,771 to 454,727
GFF2752
GFF2753 - hypothetical protein, at 454,844 to 455,731
GFF2753
Position (kb) 453
454
455 Strain fitness (log2 ratio) -1
0
1
2 at 452.860 kb on + strand, within GFF2751 at 452.860 kb on + strand, within GFF2751 at 452.860 kb on + strand, within GFF2751 at 452.861 kb on - strand, within GFF2751 at 452.861 kb on - strand, within GFF2751 at 452.878 kb on + strand, within GFF2751 at 452.879 kb on - strand, within GFF2751 at 453.752 kb on - strand at 453.753 kb on + strand at 453.753 kb on + strand at 453.753 kb on + strand at 453.753 kb on + strand at 453.754 kb on - strand at 453.799 kb on + strand at 453.799 kb on + strand at 453.799 kb on + strand at 453.799 kb on + strand at 453.800 kb on - strand at 453.800 kb on - strand at 453.800 kb on - strand at 453.800 kb on - strand at 454.121 kb on + strand, within GFF2752 at 454.121 kb on + strand, within GFF2752 at 454.122 kb on - strand, within GFF2752 at 454.215 kb on + strand, within GFF2752 at 454.216 kb on - strand, within GFF2752 at 454.216 kb on - strand, within GFF2752 at 454.618 kb on - strand, within GFF2752 at 454.652 kb on + strand at 454.652 kb on + strand at 454.653 kb on - strand at 454.943 kb on + strand, within GFF2753 at 454.944 kb on - strand, within GFF2753 at 454.944 kb on - strand, within GFF2753 at 454.944 kb on - strand, within GFF2753 at 455.318 kb on + strand, within GFF2753 at 455.318 kb on + strand, within GFF2753 at 455.318 kb on + strand, within GFF2753 at 455.319 kb on - strand, within GFF2753 at 455.319 kb on - strand, within GFF2753 at 455.319 kb on - strand, within GFF2753 at 455.319 kb on - strand, within GFF2753 at 455.357 kb on + strand, within GFF2753 at 455.357 kb on + strand, within GFF2753 at 455.358 kb on - strand, within GFF2753 at 455.696 kb on + strand at 455.696 kb on + strand at 455.696 kb on + strand at 455.697 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 452,860 + GFF2751 0.14 +0.3 452,860 + GFF2751 0.14 +0.7 452,860 + GFF2751 0.14 +0.2 452,861 - GFF2751 0.15 +1.5 452,861 - GFF2751 0.15 -0.8 452,878 + GFF2751 0.16 -0.4 452,879 - GFF2751 0.16 +0.8 453,752 - +0.0 453,753 + +0.6 453,753 + -1.0 453,753 + -1.2 453,753 + -1.0 453,754 - -0.2 453,799 + -0.6 453,799 + -0.8 453,799 + -0.3 453,799 + -0.8 453,800 - -0.8 453,800 - -0.2 453,800 - -0.3 453,800 - -0.2 454,121 + GFF2752 0.37 -0.9 454,121 + GFF2752 0.37 -0.1 454,122 - GFF2752 0.37 -1.4 454,215 + GFF2752 0.46 -1.7 454,216 - GFF2752 0.46 +0.5 454,216 - GFF2752 0.46 -1.7 454,618 - GFF2752 0.89 +0.1 454,652 + +0.2 454,652 + +0.3 454,653 - -0.1 454,943 + GFF2753 0.11 -0.2 454,944 - GFF2753 0.11 -0.5 454,944 - GFF2753 0.11 +0.3 454,944 - GFF2753 0.11 +0.2 455,318 + GFF2753 0.53 +0.6 455,318 + GFF2753 0.53 -0.1 455,318 + GFF2753 0.53 +1.0 455,319 - GFF2753 0.53 -0.1 455,319 - GFF2753 0.53 +0.9 455,319 - GFF2753 0.53 -0.3 455,319 - GFF2753 0.53 +0.6 455,357 + GFF2753 0.58 -0.2 455,357 + GFF2753 0.58 +0.2 455,358 - GFF2753 0.58 +0.6 455,696 + +1.9 455,696 + -1.7 455,696 + +0.4 455,697 - -0.6
Or see this region's nucleotide sequence