Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF273 and GFF274 are separated by 299 nucleotides GFF274 and GFF275 are separated by 62 nucleotides
GFF273 - hypothetical protein, at 288,213 to 289,022
GFF273
GFF274 - P-loop guanosine triphosphatase YjiA, at 289,322 to 290,392
GFF274
GFF275 - Manganese-binding lipoprotein MntA, at 290,455 to 291,444
GFF275
Position (kb) 289
290
291 Strain fitness (log2 ratio) -2
-1
0
1
2 at 288.454 kb on + strand, within GFF273 at 288.454 kb on + strand, within GFF273 at 288.454 kb on + strand, within GFF273 at 288.455 kb on - strand, within GFF273 at 288.455 kb on - strand, within GFF273 at 288.547 kb on + strand, within GFF273 at 288.640 kb on + strand, within GFF273 at 288.641 kb on - strand, within GFF273 at 288.641 kb on - strand, within GFF273 at 288.641 kb on - strand, within GFF273 at 288.688 kb on + strand, within GFF273 at 288.751 kb on + strand, within GFF273 at 288.751 kb on + strand, within GFF273 at 288.752 kb on - strand, within GFF273 at 288.752 kb on - strand, within GFF273 at 288.752 kb on - strand, within GFF273 at 288.850 kb on + strand, within GFF273 at 288.850 kb on + strand, within GFF273 at 288.851 kb on - strand, within GFF273 at 289.246 kb on + strand at 289.246 kb on + strand at 289.620 kb on + strand, within GFF274 at 289.625 kb on + strand, within GFF274 at 289.625 kb on + strand, within GFF274 at 289.626 kb on - strand, within GFF274 at 289.836 kb on + strand, within GFF274 at 289.837 kb on - strand, within GFF274 at 290.058 kb on + strand, within GFF274 at 290.511 kb on - strand at 290.552 kb on + strand at 290.553 kb on - strand at 290.553 kb on - strand at 290.741 kb on + strand, within GFF275 at 290.741 kb on + strand, within GFF275 at 290.879 kb on + strand, within GFF275 at 290.879 kb on + strand, within GFF275 at 290.879 kb on + strand, within GFF275 at 290.880 kb on - strand, within GFF275 at 290.880 kb on - strand, within GFF275 at 290.880 kb on - strand, within GFF275 at 290.936 kb on + strand, within GFF275 at 290.936 kb on + strand, within GFF275 at 290.936 kb on + strand, within GFF275 at 290.936 kb on + strand, within GFF275 at 291.228 kb on - strand, within GFF275
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 288,454 + GFF273 0.30 -0.4 288,454 + GFF273 0.30 -0.4 288,454 + GFF273 0.30 +0.1 288,455 - GFF273 0.30 -0.0 288,455 - GFF273 0.30 +0.2 288,547 + GFF273 0.41 -0.9 288,640 + GFF273 0.53 -0.7 288,641 - GFF273 0.53 -0.2 288,641 - GFF273 0.53 +0.1 288,641 - GFF273 0.53 -0.4 288,688 + GFF273 0.59 +0.3 288,751 + GFF273 0.66 -0.1 288,751 + GFF273 0.66 +0.9 288,752 - GFF273 0.67 -0.8 288,752 - GFF273 0.67 +1.1 288,752 - GFF273 0.67 +0.6 288,850 + GFF273 0.79 -1.1 288,850 + GFF273 0.79 +0.8 288,851 - GFF273 0.79 +2.1 289,246 + -0.5 289,246 + -0.6 289,620 + GFF274 0.28 -1.7 289,625 + GFF274 0.28 +0.4 289,625 + GFF274 0.28 +0.0 289,626 - GFF274 0.28 +0.2 289,836 + GFF274 0.48 -0.6 289,837 - GFF274 0.48 +0.3 290,058 + GFF274 0.69 +0.6 290,511 - +0.9 290,552 + +0.1 290,553 - -0.1 290,553 - +0.5 290,741 + GFF275 0.29 +1.1 290,741 + GFF275 0.29 +0.9 290,879 + GFF275 0.43 +1.4 290,879 + GFF275 0.43 +0.4 290,879 + GFF275 0.43 +0.4 290,880 - GFF275 0.43 +0.3 290,880 - GFF275 0.43 +0.1 290,880 - GFF275 0.43 +0.7 290,936 + GFF275 0.49 +0.1 290,936 + GFF275 0.49 -0.0 290,936 + GFF275 0.49 +0.9 290,936 + GFF275 0.49 -1.8 291,228 - GFF275 0.78 -0.5
Or see this region's nucleotide sequence