Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2492 and GFF2493 overlap by 25 nucleotides GFF2493 and GFF2494 are separated by 193 nucleotides
GFF2492 - hypothetical protein, at 153,318 to 154,562
GFF2492
GFF2493 - Beta-methylmalyl-CoA dehydratase, at 154,538 to 155,590
GFF2493
GFF2494 - Ferrous-iron efflux pump FieF, at 155,784 to 156,698
GFF2494
Position (kb) 154
155
156 Strain fitness (log2 ratio) -2
-1
0
1
2 at 153.819 kb on + strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.820 kb on - strand, within GFF2492 at 153.927 kb on + strand, within GFF2492 at 153.929 kb on + strand, within GFF2492 at 153.929 kb on + strand, within GFF2492 at 153.930 kb on - strand, within GFF2492 at 154.002 kb on + strand, within GFF2492 at 154.062 kb on + strand, within GFF2492 at 154.063 kb on - strand, within GFF2492 at 154.251 kb on - strand, within GFF2492 at 154.320 kb on + strand, within GFF2492 at 154.320 kb on + strand, within GFF2492 at 154.320 kb on + strand, within GFF2492 at 154.321 kb on - strand, within GFF2492 at 154.590 kb on + strand at 154.846 kb on - strand, within GFF2493 at 154.917 kb on + strand, within GFF2493 at 155.169 kb on + strand, within GFF2493 at 155.169 kb on + strand, within GFF2493 at 155.169 kb on + strand, within GFF2493 at 155.217 kb on + strand, within GFF2493 at 155.217 kb on + strand, within GFF2493 at 155.217 kb on + strand, within GFF2493 at 155.218 kb on - strand, within GFF2493 at 155.295 kb on + strand, within GFF2493 at 155.325 kb on + strand, within GFF2493 at 155.475 kb on + strand, within GFF2493 at 155.476 kb on - strand, within GFF2493 at 155.476 kb on - strand, within GFF2493 at 155.476 kb on - strand, within GFF2493 at 155.488 kb on - strand at 155.488 kb on - strand at 155.592 kb on + strand at 155.592 kb on + strand at 155.592 kb on + strand at 155.593 kb on - strand at 155.593 kb on - strand at 155.853 kb on + strand at 155.854 kb on - strand at 155.985 kb on + strand, within GFF2494 at 155.985 kb on + strand, within GFF2494 at 155.986 kb on - strand, within GFF2494 at 155.986 kb on - strand, within GFF2494 at 155.986 kb on - strand, within GFF2494 at 155.986 kb on - strand, within GFF2494 at 155.986 kb on - strand, within GFF2494 at 155.991 kb on + strand, within GFF2494 at 155.991 kb on + strand, within GFF2494 at 156.316 kb on - strand, within GFF2494 at 156.318 kb on + strand, within GFF2494 at 156.319 kb on - strand, within GFF2494 at 156.363 kb on + strand, within GFF2494 at 156.372 kb on + strand, within GFF2494 at 156.373 kb on - strand, within GFF2494 at 156.373 kb on - strand, within GFF2494
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 153,819 + GFF2492 0.40 -0.3 153,820 - GFF2492 0.40 +0.1 153,820 - GFF2492 0.40 -0.4 153,820 - GFF2492 0.40 -0.3 153,820 - GFF2492 0.40 -0.1 153,820 - GFF2492 0.40 +0.0 153,820 - GFF2492 0.40 -0.3 153,927 + GFF2492 0.49 +0.4 153,929 + GFF2492 0.49 -0.2 153,929 + GFF2492 0.49 +1.0 153,930 - GFF2492 0.49 -0.3 154,002 + GFF2492 0.55 -0.0 154,062 + GFF2492 0.60 +0.7 154,063 - GFF2492 0.60 -1.5 154,251 - GFF2492 0.75 +0.6 154,320 + GFF2492 0.80 -0.5 154,320 + GFF2492 0.80 +1.0 154,320 + GFF2492 0.80 +0.5 154,321 - GFF2492 0.81 +0.8 154,590 + +1.1 154,846 - GFF2493 0.29 +0.8 154,917 + GFF2493 0.36 +1.0 155,169 + GFF2493 0.60 -0.1 155,169 + GFF2493 0.60 +1.3 155,169 + GFF2493 0.60 -0.2 155,217 + GFF2493 0.64 +0.7 155,217 + GFF2493 0.64 -2.6 155,217 + GFF2493 0.64 -0.9 155,218 - GFF2493 0.65 -0.3 155,295 + GFF2493 0.72 -0.0 155,325 + GFF2493 0.75 -0.3 155,475 + GFF2493 0.89 -0.0 155,476 - GFF2493 0.89 +0.1 155,476 - GFF2493 0.89 -1.8 155,476 - GFF2493 0.89 -0.1 155,488 - +0.3 155,488 - +1.8 155,592 + -0.6 155,592 + +1.5 155,592 + -0.2 155,593 - -0.5 155,593 - +0.3 155,853 + -0.3 155,854 - -0.5 155,985 + GFF2494 0.22 +0.4 155,985 + GFF2494 0.22 +0.3 155,986 - GFF2494 0.22 +1.0 155,986 - GFF2494 0.22 -0.9 155,986 - GFF2494 0.22 +0.9 155,986 - GFF2494 0.22 +1.2 155,986 - GFF2494 0.22 +1.4 155,991 + GFF2494 0.23 +0.5 155,991 + GFF2494 0.23 -0.0 156,316 - GFF2494 0.58 +0.0 156,318 + GFF2494 0.58 +0.2 156,319 - GFF2494 0.58 -1.3 156,363 + GFF2494 0.63 +1.6 156,372 + GFF2494 0.64 +0.4 156,373 - GFF2494 0.64 -1.2 156,373 - GFF2494 0.64 -0.3
Or see this region's nucleotide sequence