Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2471 and GFF2472 overlap by 1 nucleotides GFF2472 and GFF2473 are separated by 10 nucleotides GFF2473 and GFF2474 are separated by 216 nucleotides
GFF2471 - NAD(P) transhydrogenase subunit alpha part 1, at 128,393 to 129,556
GFF2471
GFF2472 - hypothetical protein, at 129,556 to 130,011
GFF2472
GFF2473 - NAD(P) transhydrogenase subunit beta, at 130,022 to 131,428
GFF2473
GFF2474 - hypothetical protein, at 131,645 to 133,060
GFF2474
Position (kb) 130
131
132 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 129.597 kb on + strand at 129.652 kb on + strand, within GFF2472 at 129.652 kb on + strand, within GFF2472 at 129.653 kb on - strand, within GFF2472 at 129.767 kb on - strand, within GFF2472 at 129.767 kb on - strand, within GFF2472 at 129.769 kb on + strand, within GFF2472 at 129.769 kb on + strand, within GFF2472 at 129.769 kb on + strand, within GFF2472 at 129.770 kb on - strand, within GFF2472 at 129.770 kb on - strand, within GFF2472 at 129.770 kb on - strand, within GFF2472 at 129.995 kb on - strand at 129.995 kb on - strand at 130.049 kb on + strand at 130.349 kb on + strand, within GFF2473 at 130.349 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.796 kb on + strand, within GFF2473 at 130.797 kb on - strand, within GFF2473 at 130.797 kb on - strand, within GFF2473 at 130.797 kb on - strand, within GFF2473 at 130.797 kb on - strand, within GFF2473 at 130.934 kb on + strand, within GFF2473 at 130.934 kb on + strand, within GFF2473 at 130.935 kb on - strand, within GFF2473 at 130.935 kb on - strand, within GFF2473 at 130.976 kb on + strand, within GFF2473 at 131.057 kb on + strand, within GFF2473 at 131.057 kb on + strand, within GFF2473 at 131.058 kb on - strand, within GFF2473 at 131.058 kb on - strand, within GFF2473 at 131.129 kb on + strand, within GFF2473 at 131.129 kb on + strand, within GFF2473 at 131.129 kb on + strand, within GFF2473 at 131.252 kb on + strand, within GFF2473 at 131.253 kb on - strand, within GFF2473 at 131.253 kb on - strand, within GFF2473 at 131.560 kb on - strand at 131.584 kb on - strand at 131.598 kb on - strand at 131.745 kb on + strand at 131.795 kb on + strand, within GFF2474 at 131.795 kb on + strand, within GFF2474 at 131.795 kb on + strand, within GFF2474 at 131.796 kb on - strand, within GFF2474 at 131.796 kb on - strand, within GFF2474 at 131.796 kb on - strand, within GFF2474 at 131.796 kb on - strand, within GFF2474 at 131.796 kb on - strand, within GFF2474 at 131.840 kb on + strand, within GFF2474 at 131.840 kb on + strand, within GFF2474 at 131.841 kb on - strand, within GFF2474 at 131.841 kb on - strand, within GFF2474 at 131.870 kb on - strand, within GFF2474 at 131.870 kb on - strand, within GFF2474 at 131.915 kb on + strand, within GFF2474 at 131.915 kb on + strand, within GFF2474 at 131.915 kb on + strand, within GFF2474 at 131.916 kb on - strand, within GFF2474 at 131.916 kb on - strand, within GFF2474 at 131.916 kb on - strand, within GFF2474 at 131.916 kb on - strand, within GFF2474 at 131.918 kb on + strand, within GFF2474 at 131.918 kb on + strand, within GFF2474 at 132.113 kb on + strand, within GFF2474 at 132.251 kb on + strand, within GFF2474 at 132.252 kb on - strand, within GFF2474 at 132.339 kb on - strand, within GFF2474 at 132.339 kb on - strand, within GFF2474 at 132.396 kb on - strand, within GFF2474 at 132.396 kb on - strand, within GFF2474 at 132.396 kb on - strand, within GFF2474
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 129,597 + -0.2 129,652 + GFF2472 0.21 -1.4 129,652 + GFF2472 0.21 +2.0 129,653 - GFF2472 0.21 -1.2 129,767 - GFF2472 0.46 -0.5 129,767 - GFF2472 0.46 -0.7 129,769 + GFF2472 0.47 +0.7 129,769 + GFF2472 0.47 +0.9 129,769 + GFF2472 0.47 +1.2 129,770 - GFF2472 0.47 -1.2 129,770 - GFF2472 0.47 +0.1 129,770 - GFF2472 0.47 -0.1 129,995 - -0.7 129,995 - +0.3 130,049 + +1.2 130,349 + GFF2473 0.23 -0.2 130,349 + GFF2473 0.23 -1.8 130,796 + GFF2473 0.55 +0.4 130,796 + GFF2473 0.55 -0.2 130,796 + GFF2473 0.55 -0.7 130,796 + GFF2473 0.55 +0.2 130,796 + GFF2473 0.55 +0.4 130,796 + GFF2473 0.55 -0.7 130,796 + GFF2473 0.55 -1.4 130,796 + GFF2473 0.55 -0.6 130,796 + GFF2473 0.55 +0.3 130,797 - GFF2473 0.55 -2.4 130,797 - GFF2473 0.55 -1.3 130,797 - GFF2473 0.55 -1.7 130,797 - GFF2473 0.55 +0.6 130,934 + GFF2473 0.65 -0.0 130,934 + GFF2473 0.65 +0.3 130,935 - GFF2473 0.65 -0.7 130,935 - GFF2473 0.65 +0.2 130,976 + GFF2473 0.68 -0.2 131,057 + GFF2473 0.74 -0.4 131,057 + GFF2473 0.74 -1.3 131,058 - GFF2473 0.74 -2.1 131,058 - GFF2473 0.74 -0.3 131,129 + GFF2473 0.79 -0.3 131,129 + GFF2473 0.79 -0.3 131,129 + GFF2473 0.79 -1.5 131,252 + GFF2473 0.87 +1.8 131,253 - GFF2473 0.87 +1.6 131,253 - GFF2473 0.87 -0.9 131,560 - -1.0 131,584 - +1.5 131,598 - +0.1 131,745 + -0.9 131,795 + GFF2474 0.11 -0.2 131,795 + GFF2474 0.11 -0.0 131,795 + GFF2474 0.11 +0.0 131,796 - GFF2474 0.11 +0.6 131,796 - GFF2474 0.11 +0.3 131,796 - GFF2474 0.11 -0.0 131,796 - GFF2474 0.11 -0.5 131,796 - GFF2474 0.11 -3.0 131,840 + GFF2474 0.14 +1.0 131,840 + GFF2474 0.14 -1.1 131,841 - GFF2474 0.14 -0.3 131,841 - GFF2474 0.14 +0.4 131,870 - GFF2474 0.16 +1.4 131,870 - GFF2474 0.16 -0.3 131,915 + GFF2474 0.19 +0.4 131,915 + GFF2474 0.19 -0.5 131,915 + GFF2474 0.19 -0.0 131,916 - GFF2474 0.19 -0.1 131,916 - GFF2474 0.19 -0.9 131,916 - GFF2474 0.19 +0.1 131,916 - GFF2474 0.19 -0.1 131,918 + GFF2474 0.19 +0.0 131,918 + GFF2474 0.19 -0.4 132,113 + GFF2474 0.33 +0.1 132,251 + GFF2474 0.43 -0.7 132,252 - GFF2474 0.43 +0.2 132,339 - GFF2474 0.49 +0.4 132,339 - GFF2474 0.49 -0.5 132,396 - GFF2474 0.53 +1.2 132,396 - GFF2474 0.53 +0.4 132,396 - GFF2474 0.53 +0.4
Or see this region's nucleotide sequence