Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2311 and GFF2312 are separated by 145 nucleotides GFF2312 and GFF2313 are separated by 4 nucleotides
GFF2311 - Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, at 1,023,472 to 1,025,268
GFF2311
GFF2312 - hypothetical protein, at 1,025,414 to 1,026,115
GFF2312
GFF2313 - Putative aminoglycoside phosphotransferase, at 1,026,120 to 1,027,136
GFF2313
Position (kb) 1025
1026
1027 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1024.449 kb on - strand, within GFF2311 at 1024.459 kb on - strand, within GFF2311 at 1024.543 kb on + strand, within GFF2311 at 1024.544 kb on - strand, within GFF2311 at 1024.544 kb on - strand, within GFF2311 at 1024.608 kb on + strand, within GFF2311 at 1024.610 kb on + strand, within GFF2311 at 1024.610 kb on + strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.611 kb on - strand, within GFF2311 at 1024.673 kb on + strand, within GFF2311 at 1024.674 kb on - strand, within GFF2311 at 1024.718 kb on + strand, within GFF2311 at 1024.718 kb on + strand, within GFF2311 at 1024.718 kb on + strand, within GFF2311 at 1024.785 kb on - strand, within GFF2311 at 1025.249 kb on + strand at 1025.250 kb on - strand at 1025.663 kb on + strand, within GFF2312 at 1025.669 kb on + strand, within GFF2312 at 1025.670 kb on - strand, within GFF2312 at 1025.670 kb on - strand, within GFF2312 at 1025.670 kb on - strand, within GFF2312 at 1026.023 kb on + strand, within GFF2312 at 1026.024 kb on - strand, within GFF2312 at 1026.024 kb on - strand, within GFF2312 at 1026.308 kb on - strand, within GFF2313 at 1026.377 kb on - strand, within GFF2313 at 1026.377 kb on - strand, within GFF2313 at 1026.469 kb on - strand, within GFF2313 at 1026.655 kb on + strand, within GFF2313 at 1026.742 kb on + strand, within GFF2313 at 1026.743 kb on - strand, within GFF2313 at 1026.743 kb on - strand, within GFF2313 at 1026.823 kb on + strand, within GFF2313 at 1026.823 kb on + strand, within GFF2313 at 1026.823 kb on + strand, within GFF2313 at 1026.823 kb on + strand, within GFF2313 at 1026.916 kb on + strand, within GFF2313 at 1026.994 kb on + strand, within GFF2313 at 1026.995 kb on - strand, within GFF2313 at 1026.995 kb on - strand, within GFF2313 at 1026.995 kb on - strand, within GFF2313 at 1026.995 kb on - strand, within GFF2313
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 1,024,449 - GFF2311 0.54 -0.3 1,024,459 - GFF2311 0.55 -0.1 1,024,543 + GFF2311 0.60 +0.9 1,024,544 - GFF2311 0.60 +0.2 1,024,544 - GFF2311 0.60 +1.1 1,024,608 + GFF2311 0.63 -1.2 1,024,610 + GFF2311 0.63 -0.4 1,024,610 + GFF2311 0.63 -1.2 1,024,611 - GFF2311 0.63 +0.0 1,024,611 - GFF2311 0.63 +0.8 1,024,611 - GFF2311 0.63 -0.4 1,024,611 - GFF2311 0.63 -0.1 1,024,611 - GFF2311 0.63 +0.1 1,024,611 - GFF2311 0.63 -0.7 1,024,673 + GFF2311 0.67 -0.6 1,024,674 - GFF2311 0.67 -0.2 1,024,718 + GFF2311 0.69 -1.9 1,024,718 + GFF2311 0.69 +1.3 1,024,718 + GFF2311 0.69 -0.1 1,024,785 - GFF2311 0.73 +0.1 1,025,249 + -0.3 1,025,250 - +0.9 1,025,663 + GFF2312 0.35 -0.6 1,025,669 + GFF2312 0.36 +0.6 1,025,670 - GFF2312 0.36 -0.8 1,025,670 - GFF2312 0.36 +0.1 1,025,670 - GFF2312 0.36 -0.2 1,026,023 + GFF2312 0.87 -2.1 1,026,024 - GFF2312 0.87 +0.0 1,026,024 - GFF2312 0.87 -0.8 1,026,308 - GFF2313 0.18 -0.9 1,026,377 - GFF2313 0.25 -0.1 1,026,377 - GFF2313 0.25 +0.3 1,026,469 - GFF2313 0.34 +0.2 1,026,655 + GFF2313 0.53 -0.3 1,026,742 + GFF2313 0.61 +0.6 1,026,743 - GFF2313 0.61 -1.1 1,026,743 - GFF2313 0.61 -0.4 1,026,823 + GFF2313 0.69 +1.8 1,026,823 + GFF2313 0.69 -0.1 1,026,823 + GFF2313 0.69 +1.0 1,026,823 + GFF2313 0.69 -0.7 1,026,916 + GFF2313 0.78 +0.4 1,026,994 + GFF2313 0.86 +0.5 1,026,995 - GFF2313 0.86 -1.9 1,026,995 - GFF2313 0.86 -0.7 1,026,995 - GFF2313 0.86 +0.5 1,026,995 - GFF2313 0.86 +0.3
Or see this region's nucleotide sequence