Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2280 and GFF2281 are separated by 7 nucleotides GFF2281 and GFF2282 are separated by 10 nucleotides GFF2282 and GFF2283 are separated by 123 nucleotides
GFF2280 - hypothetical protein, at 988,708 to 989,580
GFF2280
GFF2281 - hypothetical protein, at 989,588 to 990,064
GFF2281
GFF2282 - hypothetical protein, at 990,075 to 990,794
GFF2282
GFF2283 - putative inner membrane transporter YedA, at 990,918 to 991,811
GFF2283
Position (kb) 990
991 Strain fitness (log2 ratio) -2
-1
0
1
2 at 989.110 kb on + strand, within GFF2280 at 989.111 kb on - strand, within GFF2280 at 989.389 kb on + strand, within GFF2280 at 989.389 kb on + strand, within GFF2280 at 989.413 kb on + strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.426 kb on - strand, within GFF2280 at 990.032 kb on + strand at 990.032 kb on + strand at 990.062 kb on + strand at 990.063 kb on - strand at 990.437 kb on + strand, within GFF2282 at 990.437 kb on + strand, within GFF2282 at 990.446 kb on - strand, within GFF2282 at 990.446 kb on - strand, within GFF2282 at 990.572 kb on - strand, within GFF2282 at 990.575 kb on - strand, within GFF2282 at 990.770 kb on + strand at 990.770 kb on + strand at 990.771 kb on - strand at 990.879 kb on - strand at 990.990 kb on + strand at 991.436 kb on - strand, within GFF2283 at 991.624 kb on - strand, within GFF2283 at 991.675 kb on - strand, within GFF2283 at 991.675 kb on - strand, within GFF2283 at 991.675 kb on - strand, within GFF2283
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 989,110 + GFF2280 0.46 -0.3 989,111 - GFF2280 0.46 +0.1 989,389 + GFF2280 0.78 +0.6 989,389 + GFF2280 0.78 -1.2 989,413 + GFF2280 0.81 -0.7 989,414 - GFF2280 0.81 -0.5 989,414 - GFF2280 0.81 -0.5 989,414 - GFF2280 0.81 +1.0 989,425 + GFF2280 0.82 -0.3 989,425 + GFF2280 0.82 +2.2 989,425 + GFF2280 0.82 -1.9 989,426 - GFF2280 0.82 -1.3 990,032 + -0.6 990,032 + +0.2 990,062 + -0.7 990,063 - -0.8 990,437 + GFF2282 0.50 +0.1 990,437 + GFF2282 0.50 -0.2 990,446 - GFF2282 0.52 +0.6 990,446 - GFF2282 0.52 +0.3 990,572 - GFF2282 0.69 +0.8 990,575 - GFF2282 0.69 +0.4 990,770 + +1.4 990,770 + +0.6 990,771 - +1.6 990,879 - +0.9 990,990 + +0.8 991,436 - GFF2283 0.58 +0.6 991,624 - GFF2283 0.79 +0.5 991,675 - GFF2283 0.85 -0.6 991,675 - GFF2283 0.85 +0.1 991,675 - GFF2283 0.85 +0.5
Or see this region's nucleotide sequence