Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2230 and GFF2231 are separated by 13 nucleotides GFF2231 and GFF2232 are separated by 4 nucleotides GFF2232 and GFF2233 are separated by 85 nucleotides
GFF2230 - hypothetical protein, at 933,736 to 934,713
GFF2230
GFF2231 - Chaperone protein DnaJ, at 934,727 to 935,869
GFF2231
GFF2232 - hypothetical protein, at 935,874 to 936,314
GFF2232
GFF2233 - Chaperone protein DnaK, at 936,400 to 938,295
GFF2233
Position (kb) 934
935
936 Strain fitness (log2 ratio) -2
-1
0
1
2 at 933.734 kb on + strand at 933.976 kb on - strand, within GFF2230 at 933.976 kb on - strand, within GFF2230 at 933.986 kb on - strand, within GFF2230 at 933.986 kb on - strand, within GFF2230 at 934.099 kb on + strand, within GFF2230 at 934.432 kb on + strand, within GFF2230 at 934.432 kb on + strand, within GFF2230 at 934.433 kb on - strand, within GFF2230 at 934.591 kb on + strand, within GFF2230 at 934.591 kb on + strand, within GFF2230 at 934.592 kb on - strand, within GFF2230 at 934.592 kb on - strand, within GFF2230 at 934.592 kb on - strand, within GFF2230 at 934.592 kb on - strand, within GFF2230 at 934.594 kb on - strand, within GFF2230 at 934.666 kb on + strand at 934.890 kb on + strand, within GFF2231 at 934.890 kb on + strand, within GFF2231 at 934.890 kb on + strand, within GFF2231 at 934.891 kb on - strand, within GFF2231 at 934.891 kb on - strand, within GFF2231 at 934.891 kb on - strand, within GFF2231 at 934.891 kb on - strand, within GFF2231 at 934.891 kb on - strand, within GFF2231 at 936.113 kb on - strand, within GFF2232 at 936.133 kb on + strand, within GFF2232 at 936.133 kb on + strand, within GFF2232 at 936.134 kb on - strand, within GFF2232 at 936.134 kb on - strand, within GFF2232 at 936.134 kb on - strand, within GFF2232 at 936.211 kb on + strand, within GFF2232 at 936.212 kb on - strand, within GFF2232 at 936.368 kb on + strand at 936.369 kb on - strand at 936.369 kb on - strand at 936.369 kb on - strand at 936.504 kb on - strand at 936.504 kb on - strand at 936.504 kb on - strand at 936.504 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 933,734 + -0.9 933,976 - GFF2230 0.25 +0.0 933,976 - GFF2230 0.25 +1.4 933,986 - GFF2230 0.26 -0.5 933,986 - GFF2230 0.26 +0.6 934,099 + GFF2230 0.37 +1.6 934,432 + GFF2230 0.71 -0.6 934,432 + GFF2230 0.71 -0.3 934,433 - GFF2230 0.71 +0.4 934,591 + GFF2230 0.87 -0.7 934,591 + GFF2230 0.87 +1.5 934,592 - GFF2230 0.88 -0.8 934,592 - GFF2230 0.88 -0.9 934,592 - GFF2230 0.88 -0.5 934,592 - GFF2230 0.88 -1.2 934,594 - GFF2230 0.88 +0.7 934,666 + +0.5 934,890 + GFF2231 0.14 -0.2 934,890 + GFF2231 0.14 +1.4 934,890 + GFF2231 0.14 +0.4 934,891 - GFF2231 0.14 +0.4 934,891 - GFF2231 0.14 +0.6 934,891 - GFF2231 0.14 -2.0 934,891 - GFF2231 0.14 +2.4 934,891 - GFF2231 0.14 -0.8 936,113 - GFF2232 0.54 +1.5 936,133 + GFF2232 0.59 -1.3 936,133 + GFF2232 0.59 +0.6 936,134 - GFF2232 0.59 -0.4 936,134 - GFF2232 0.59 -0.8 936,134 - GFF2232 0.59 -0.3 936,211 + GFF2232 0.76 -1.3 936,212 - GFF2232 0.77 -0.1 936,368 + -0.6 936,369 - +1.4 936,369 - -0.9 936,369 - +0.1 936,504 - -0.0 936,504 - -1.2 936,504 - +2.1 936,504 - -0.6
Or see this region's nucleotide sequence