Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2207 and GFF2208 are separated by 443 nucleotides GFF2208 and GFF2209 are separated by 67 nucleotides GFF2209 and GFF2210 overlap by 1 nucleotides
GFF2207 - hypothetical protein, at 910,716 to 910,946
GFF2207
GFF2208 - hypothetical protein, at 911,390 to 911,617
GFF2208
GFF2209 - hypothetical protein, at 911,685 to 912,266
GFF2209
GFF2210 - hypothetical protein, at 912,266 to 914,833
GFF2210
Position (kb) 911
912 Strain fitness (log2 ratio) -1
0
1 at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.571 kb on - strand at 910.839 kb on - strand, within GFF2207 at 910.936 kb on + strand at 910.937 kb on - strand at 910.944 kb on + strand at 911.354 kb on + strand at 911.354 kb on + strand at 911.390 kb on - strand at 911.390 kb on - strand at 911.390 kb on - strand at 911.469 kb on + strand, within GFF2208 at 911.469 kb on + strand, within GFF2208 at 911.469 kb on + strand, within GFF2208 at 911.694 kb on - strand at 912.007 kb on + strand, within GFF2209 at 912.030 kb on + strand, within GFF2209 at 912.031 kb on - strand, within GFF2209 at 912.031 kb on - strand, within GFF2209 at 912.148 kb on + strand, within GFF2209 at 912.148 kb on + strand, within GFF2209 at 912.148 kb on + strand, within GFF2209 at 912.149 kb on - strand, within GFF2209 at 912.149 kb on - strand, within GFF2209 at 912.474 kb on + strand at 912.474 kb on + strand at 912.474 kb on + strand at 912.474 kb on + strand at 912.475 kb on - strand at 912.475 kb on - strand at 912.475 kb on - strand at 912.475 kb on - strand at 912.475 kb on - strand at 912.526 kb on + strand, within GFF2210 at 912.526 kb on + strand, within GFF2210 at 912.526 kb on + strand, within GFF2210 at 912.527 kb on - strand, within GFF2210 at 912.547 kb on - strand, within GFF2210 at 912.580 kb on + strand, within GFF2210 at 912.580 kb on + strand, within GFF2210 at 912.580 kb on + strand, within GFF2210 at 912.581 kb on - strand, within GFF2210 at 912.581 kb on - strand, within GFF2210 at 912.589 kb on + strand, within GFF2210 at 912.590 kb on - strand, within GFF2210 at 912.614 kb on + strand, within GFF2210 at 912.614 kb on + strand, within GFF2210 at 912.615 kb on - strand, within GFF2210 at 912.615 kb on - strand, within GFF2210
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 910,570 + -1.4 910,570 + +0.6 910,570 + -1.2 910,570 + +0.4 910,570 + +1.3 910,570 + +0.2 910,570 + -0.3 910,571 - -0.9 910,839 - GFF2207 0.53 -1.7 910,936 + +1.3 910,937 - +0.5 910,944 + +1.2 911,354 + -0.7 911,354 + +1.6 911,390 - +0.4 911,390 - +1.2 911,390 - +0.5 911,469 + GFF2208 0.35 -0.1 911,469 + GFF2208 0.35 +0.3 911,469 + GFF2208 0.35 -0.2 911,694 - +0.9 912,007 + GFF2209 0.55 -0.4 912,030 + GFF2209 0.59 +0.0 912,031 - GFF2209 0.59 +0.4 912,031 - GFF2209 0.59 -1.3 912,148 + GFF2209 0.80 -0.4 912,148 + GFF2209 0.80 +0.5 912,148 + GFF2209 0.80 +0.0 912,149 - GFF2209 0.80 +0.2 912,149 - GFF2209 0.80 +0.6 912,474 + -1.6 912,474 + +0.4 912,474 + +0.1 912,474 + +0.2 912,475 - +0.5 912,475 - +0.1 912,475 - +0.8 912,475 - -0.6 912,475 - +0.2 912,526 + GFF2210 0.10 +0.5 912,526 + GFF2210 0.10 -0.6 912,526 + GFF2210 0.10 +0.9 912,527 - GFF2210 0.10 +0.1 912,547 - GFF2210 0.11 +0.8 912,580 + GFF2210 0.12 -1.3 912,580 + GFF2210 0.12 -0.9 912,580 + GFF2210 0.12 -0.8 912,581 - GFF2210 0.12 +0.5 912,581 - GFF2210 0.12 -0.6 912,589 + GFF2210 0.13 -0.6 912,590 - GFF2210 0.13 +0.5 912,614 + GFF2210 0.14 +0.7 912,614 + GFF2210 0.14 -0.2 912,615 - GFF2210 0.14 -1.0 912,615 - GFF2210 0.14 +0.6
Or see this region's nucleotide sequence